RNA id: TCONS_00046361



Basic Information


Item Value
RNA id TCONS_00046361
length 807
RNA type mRNA
GC content 0.47
exon number 1
gene id XLOC_023439
representative True

Chromosome Information


Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 21990964 ~ 21991770 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


atgtacacggaccGTTCTGGTCCATGTCCCCCGACACTGGAGACTCTGCGATATCTACACCTGAACCACTTACTGACGGTTCCCTTTGAAAACCTCACCATTCACACCCTGGGTCGGGTCAGGCTGGAGCTGCCACTTCTGTATGAAAAAATCGTGGTGAATTATCGTGGAGGATTCTGCTTTGAGATTAACGGACTCTTCTCCTGGCTGCTGTCTCAGATGGGTTATGATGTCACTTTGCTCTCGGCACAGGTCAGAAATCGGTTTACCGGAGTTTACGGACCTCCATTTGACCACTTCCTCATGATGGTGATGGTGGATGAACACAGGTGGCTCTGTGATGTTGGGTTTGGGTCTGGATTCCAGCTTCCTCTTTCTCTTGAGACTGACAGTCCTCAGATTCAGAGCCACGGCGTTTATCGCCTCAGATCTGAAGGAAACTTGATTTTCATGGAAAGTAAGTCAGAGATTGGTGGGGAATGTTGGACAGAACAGTATAAGTTCACTCTGGAGCCTCGAGACAGAGCTGATTTCAGAGCCATGTGTGACTACCATCAGAGTTCTGTTAGCTCACTTTTTTTCTGCAAGTCTCTCTGTTCACTGTTGTTGCCCACCGGGAGAATCACCATCATGGGCCGCAGACTGATTATAAGCAGTTTGGGCTCAGATGATGGAGAACATGCATCAAGAACCATAACAGATCTTTCAGATGAAGAAATCACAGAGTTGTTGAGGGAGAAGTTTGGAATTGTTCTTCAAGCTCCACTCATTCCTAAAGATATTGAGATTGTACCACCAAACAATtag

Function


GO:

id name namespace
GO:0016407 acetyltransferase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0004060 arylamine N-acetyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040724-93 Predicted to enable arylamine N-acetyltransferase activity. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); carcinoma (multiple); contact dermatitis (multiple); leukemia (multiple); and lung disease (multiple). Orthologous to human NAT1 (N-acetyltransferase 1) and NAT2 (N-acetyltransferase 2).

Ensembl:

ensembl_id ENSDART00000147296

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00046337 lncRNA downstream 370708 21611602 ~ 21620256 (-) True XLOC_023424
TCONS_00046855 lncRNA downstream 621210 21331016 ~ 21369754 (-) False XLOC_023421
TCONS_00046322 lncRNA downstream 621384 21368211 ~ 21369580 (-) True XLOC_023421
TCONS_00047176 lncRNA downstream 759793 21226533 ~ 21231171 (-) False XLOC_023420
TCONS_00047177 lncRNA upstream 62039 22053809 ~ 22066831 (-) True XLOC_023442
TCONS_00046366 lncRNA upstream 79451 22071221 ~ 22074272 (-) False XLOC_023443
TCONS_00046367 lncRNA upstream 79451 22071221 ~ 22077479 (-) False XLOC_023443
TCONS_00046370 lncRNA upstream 132116 22123886 ~ 22149868 (-) False XLOC_023444
TCONS_00046373 lncRNA upstream 699213 22690983 ~ 22701598 (-) False XLOC_023444
TCONS_00046360 mRNA downstream 1558 21978230 ~ 21989406 (-) True XLOC_023438
TCONS_00046356 mRNA downstream 17599 21959708 ~ 21973365 (-) False XLOC_023436
TCONS_00046355 mRNA downstream 17599 21959708 ~ 21973365 (-) False XLOC_023436
TCONS_00046359 mRNA downstream 17801 21964050 ~ 21973163 (-) True XLOC_023436
TCONS_00046354 mRNA downstream 38800 21938741 ~ 21952164 (-) True XLOC_023435
TCONS_00046362 mRNA upstream 10320 22002090 ~ 22003031 (-) True XLOC_023440
TCONS_00046363 mRNA upstream 23040 22014810 ~ 22015751 (-) True XLOC_023441
TCONS_00046364 mRNA upstream 78520 22070290 ~ 22103585 (-) False XLOC_023443
TCONS_00046368 mRNA upstream 127034 22118804 ~ 22702017 (-) False XLOC_023444
TCONS_00046369 mRNA upstream 130467 22122237 ~ 22533959 (-) False XLOC_023444
TCONS_00046358 other downstream 22848 21964050 ~ 21968116 (-) False XLOC_023436
TCONS_00046357 other downstream 27796 21963052 ~ 21963168 (-) True XLOC_023437
TCONS_00046316 other downstream 846664 21139322 ~ 21144300 (-) True XLOC_023418
TCONS_00046297 other downstream 1332296 20647475 ~ 20658668 (-) False XLOC_023409
TCONS_00046292 other downstream 1519874 20470954 ~ 20471090 (-) True XLOC_023407
TCONS_00046365 other upstream 79451 22071221 ~ 22097763 (-) True XLOC_023443
TCONS_00046371 other upstream 317174 22308944 ~ 22309058 (-) True XLOC_023445
TCONS_00046372 other upstream 380216 22371986 ~ 22372100 (-) True XLOC_023446
TCONS_00046386 other upstream 1281472 23273242 ~ 23273359 (-) True XLOC_023450
TCONS_00046400 other upstream 1979286 23971056 ~ 23977285 (-) False XLOC_023458

Expression Profile


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