Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1687806 |
| length | 261 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | si:ch211-117k10.3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 64581666 ~ 64590850 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1687804 | lncRNA | upstream | 341 | 64581110 ~ 64581346 (+) | True | LOC110494383 |
| TU1687782 | lncRNA | upstream | 62515 | 64518729 ~ 64519172 (+) | True | G1475807 |
| TU1687743 | lncRNA | upstream | 70420 | 64510927 ~ 64511267 (+) | True | G1475799 |
| TU1687731 | lncRNA | upstream | 86489 | 64494961 ~ 64495198 (+) | True | G1475787 |
| TU1687147 | lncRNA | upstream | 123651 | 64457791 ~ 64458036 (+) | True | G1475268 |
| TU1687805 | lncRNA | downstream | 3936 | 64589086 ~ 64590850 (+) | True | si:ch211-117k10.3 |
| TU1687808 | lncRNA | downstream | 8076 | 64593226 ~ 64593455 (+) | True | G1475832 |
| TU1687812 | lncRNA | downstream | 12548 | 64597698 ~ 64597919 (+) | True | G1475836 |
| TU1687819 | lncRNA | downstream | 33581 | 64618731 ~ 64629393 (+) | False | G1475842 |
| TU1687818 | lncRNA | downstream | 40622 | 64625772 ~ 64629393 (+) | True | G1475842 |
| XM_021569385.2 | mRNA | upstream | 545 | 64572003 ~ 64581142 (+) | False | LOC110494383 |
| XM_021569386.2 | mRNA | upstream | 545 | 64572003 ~ 64581142 (+) | False | LOC110494383 |
| XM_021569383.2 | mRNA | upstream | 28332 | 64527073 ~ 64553355 (+) | False | nucks1a |
| XM_021569384.2 | mRNA | upstream | 28332 | 64527073 ~ 64553355 (+) | True | nucks1a |
| XM_036950437.1 | mRNA | upstream | 301074 | 64256904 ~ 64280613 (+) | False | cldn19 |
| XM_021569390.2 | mRNA | downstream | 23044 | 64608194 ~ 64625111 (+) | False | LOC110494386 |
| XM_021569391.2 | mRNA | downstream | 23044 | 64608194 ~ 64625111 (+) | False | LOC110494386 |
| XM_021569392.2 | mRNA | downstream | 23044 | 64608194 ~ 64625111 (+) | False | LOC110494386 |
| XM_036950441.1 | mRNA | downstream | 23044 | 64608194 ~ 64625111 (+) | False | LOC110494386 |
| XR_002469268.2 | mRNA | downstream | 23044 | 64608194 ~ 64625111 (+) | False | LOC110494386 |
| TU1687795 | other | upstream | 16541 | 64563374 ~ 64565146 (+) | True | G1475820 |
| TU1686672 | other | upstream | 893597 | 63684090 ~ 63688090 (+) | True | tmcc2 |
| TU1686655 | other | upstream | 918433 | 63658444 ~ 63663254 (+) | True | srsf3b |
| TU1685904 | other | upstream | 1364093 | 63216948 ~ 63217594 (+) | True | G1474159 |
| TU1684816 | other | upstream | 1870551 | 62710339 ~ 62711136 (+) | True | G1473177 |
| TU1687820 | other | downstream | 23104 | 64608254 ~ 64622169 (+) | True | LOC110494386 |
| TU1688055 | other | downstream | 170171 | 64755321 ~ 64774706 (+) | False | LOC110494389 |
| TU1688070 | other | downstream | 170171 | 64755321 ~ 64780475 (+) | False | LOC110494389 |
| TU1688642 | other | downstream | 718267 | 65303417 ~ 65304128 (+) | True | G1476510 |
| TU1688655 | other | downstream | 740727 | 65325877 ~ 65327163 (+) | True | G1476520 |
