RNA id: XM_036950571.1


Basic Information

Item Value
RNA id XM_036950571.1
length 1103
RNA type mRNA
GC content 0.52
exon number 8
gene id slc25a26
representative False

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 71449660 ~ 71518366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ACCGAAGAAGATGTTTCTCGTGATCCGCACGTTACTCATAGGACGTCACGCGGAAATACATTAAGCAAAGATGGCAGCGTCCTTGATAAGCAAATGTTGACTGCAGTGAAGTGTCAAAAAATGCCCCATAGTTGTAAATCATTCTCAGAACGGCAACGTGAAAGCTGACAATAGAAGACTAACATGGAAAAAAGAGAATTCACTGCTTCGCTAGTGGCGGGGGGCTGTGCTGGGATGTGCGTGGACCTCACCCTCTTCCCCCTGGACACCATTAAGACCAGACTGCAAAGCCAGCAGGGCTTCACCAAGGCTGGGGGTTTCCGTGGCATCTATGCAGGGGTTCCATCTGCTGCCATCGGCTCTTTTCCCAATGCTGCTGCGTTCTTCGTCACTTATGAAAGCACCAAGTCCGCGCTCGGAGCCCACGGAGCCCTCTCAGCCCCACACATGGCACCTGTCACTCACATGCTTGGTGCCTCCCTGGGAGAAGTAATCCCGTTCTCTCTGGTCCAGTTTCCACTGTGGGAGTATTTAAAGACTCAGTGGTCACGGAGGCAAGGTCACACTCTCTACTCTTGGCAGGCTGCAGTGTGCGGAGCTTTTGCAGGTGGAATAGCAGCGTTCGTCACCACTCCCTTGGACGTGGCTAAGACCAGGATCATGTTGGCCAAGgctGGGACTAGTACAGCGAGTGGGAACATCCCACTGGTGCTGTTAGATGTGTGGAAGACTAGGGGCTTGACGGGtctgttttctggCACTATACCTCGAGTCACGTCCATCAGTCTGGGAGGTTTTATCTTCCTGGGTGCTTATGAGAAGGTCCGACGCACCCTGCTATAAAGACCCTGGCCTGGGGATGAAGGCAGGTGTGCTGTGCTGACCCAGCCTGAACTGGCCCCCGAGGAGGGACACCTGGTGTGAGTCATCCCTGATCGCATTACCCAGAGGTCTGCGTTCCTGCTCATCAGTGCGCTGCAGATTGAGTTTAACTGCGTGAATTCCATTTTAACAGCAAGGATCGCATACCTCTGAGCCGAGTATCTTCACTGTGACCATGTGAGTGGAAATGTTATTAAAAGCCATATTTTTATACAATGTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1696601 lncRNA upstream 1422 71447907 ~ 71448238 (+) True G1483721
TU1695756 lncRNA upstream 370140 71079289 ~ 71079520 (+) True G1482962
TU1695755 lncRNA upstream 371953 71077407 ~ 71077707 (+) True G1482961
TU1695753 lncRNA upstream 374091 71075366 ~ 71075569 (+) True G1482959
TU1695666 lncRNA upstream 508926 70940431 ~ 70940734 (+) True G1482873
TU1696749 lncRNA downstream 134756 71653122 ~ 71655783 (+) False G1483842
TU1696751 lncRNA downstream 134756 71653122 ~ 71655783 (+) True G1483842
TU1696878 lncRNA downstream 158546 71676912 ~ 71678012 (+) True kbtbd8
TU1696909 lncRNA downstream 173556 71691922 ~ 71692164 (+) True G1483989
TU1696975 lncRNA downstream 252441 71770807 ~ 71776235 (+) True G1484054
LOC110494500 mRNA upstream 276416 71172013 ~ 71173244 (+) True LOC110494500
XM_036950562.1 mRNA upstream 587533 70855148 ~ 70862127 (+) False slc2a9l1
XM_036950561.1 mRNA upstream 587533 70855159 ~ 70862127 (+) False slc2a9l1
XM_021569612.2 mRNA upstream 587533 70855410 ~ 70862127 (+) False slc2a9l1
XM_036950559.1 mRNA upstream 602270 70809971 ~ 70847390 (+) False LOC110494494
XM_021569629.2 mRNA downstream 152289 71670655 ~ 71678016 (+) False kbtbd8
XM_021567510.2 mRNA downstream 160023 71678389 ~ 71688655 (+) False LOC110493246
XM_036950572.1 mRNA downstream 160217 71678583 ~ 71688655 (+) False LOC110493246
XM_036950573.1 mRNA downstream 160217 71678583 ~ 71688655 (+) True LOC110493246
XR_005037244.1 mRNA downstream 184279 71702645 ~ 71702701 (+) True LOC118940657
TU1696516 other upstream 67388 71381944 ~ 71382272 (+) True G1483638
TU1696175 other upstream 269231 71178513 ~ 71180429 (+) True G1483346
TU1695603 other upstream 608430 70839620 ~ 70841230 (+) True LOC110494494
TU1695519 other upstream 793603 70650943 ~ 70656057 (+) True nampt2
TU1692848 other upstream 2450477 68994632 ~ 68999183 (+) True G1480254
TU1697747 other downstream 786357 72304723 ~ 72305412 (+) True G1484782
TU1697884 other downstream 936197 72454563 ~ 72454924 (+) True G1484897
TU1698249 other downstream 1526371 73044737 ~ 73045588 (+) True LOC110494525
TU1698303 other downstream 1604460 73122826 ~ 73125356 (+) True G1485260
TU1698921 other downstream 1762894 73281260 ~ 73282019 (+) True G1485819

Expression Profile