RNA id: TU1696606


Basic Information

Item Value
RNA id TU1696606
length 1156
lncRNA type sense_over
GC content 0.49
exon number 5
gene id slc25a26
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 71449660 ~ 71518366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GGTGAATAGAACTCCATAAGCTCCATGGTGAATAGAACTCCATAAGCTCCATGGTGAATATAACTCCATAAGCTCCATGGTGAATAGAACTCCATAAGCTCCATGGTGAATAGAACTCCATAAGCTCCATGGTGAATAGAACTCCATAAGCTCCATGGTGAATAGAACTCCATAAGCTCCATGGTGAATATTGAATAAATGTTGTTTCTTCCACATTTGGCAAGATAGTATAGACTGCAGACAGCTCTCTTCAGCTGGGTCCATTCTGTTCCCTCTTCACTTGGATGAGGCCTAACCCCCATGAACATGTTCAAAAAACAGAGCTTAGCTTCTCTTCTCTACTGACCGAGTGAGTCAATTAGTTCACATATGAGTACAGCATAACTTTATCAGCCAGGGCTCTTCTGCTGAGCAGAGGAGTTTTGGGGACCTTTACTGCACTTTTTTCTTGTCtttccctttccccttccccctctctttctgtcccgtAATGTGCTTGGGAAAAGAGCGAATGACATCATTCAGGAGATGGCGAGGGGAACACAGAAATAGCCGCGCAGTTTGGTTCCCAGCCCCAGGCCGATTCCGATGAGACTCAGTGGTCACGGAGGCAAGGTCACACTCTCTACTCTTGGCAGGCTGCAGTGTGCGGAGCTTTTGCAGGTGGAATAGCAGCGTTCGTCACCACTCCCTTGGACGTGGCTAAGACCAGGATCATGTTGGCCAAGgctGGGACTAGTACAGCGAGTGGGAACATCCCACTGGTGCTGTTAGATGTGTGGAAGACTAGGGGCTTGACGGGtctgttttctggCACTATACCTCGAGTCACGTCCATCAGTCTGGGAGGTTTTATCTTCCTGGGTGCTTATGAGAAGGTCCGACGCACCCTGCTATAAAGACCCTGGCCTGGGGATGAAGGCAGGTGTGCTGTGCTGACCCAGCCTGAACTGGCCCCCGAGGAGGGACACCTGGTGTGAGTCATCCCTGATCGCATTACCCAGAGGTCTGCGTTCCTGCTCATCAGTGCGCTGCAGATTGAGTTTAACTGCGTGAATTCCATTTTAACAGCAAGGATCGCATACCTCTGAGCCGAGTATCTTCACTGTGACCATGTGAGTGGAAATGTTATTAAAAGCCATATTTTTATACAATG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1696618 lncRNA upstream 24672 71478468 ~ 71478743 (+) True G1483735
TU1696601 lncRNA upstream 55177 71447907 ~ 71448238 (+) True G1483721
TU1695756 lncRNA upstream 423895 71079289 ~ 71079520 (+) True G1482962
TU1695755 lncRNA upstream 425708 71077407 ~ 71077707 (+) True G1482961
TU1695753 lncRNA upstream 427846 71075366 ~ 71075569 (+) True G1482959
TU1696749 lncRNA downstream 134759 71653122 ~ 71655783 (+) False G1483842
TU1696751 lncRNA downstream 134759 71653122 ~ 71655783 (+) True G1483842
TU1696878 lncRNA downstream 158549 71676912 ~ 71678012 (+) True kbtbd8
TU1696909 lncRNA downstream 173559 71691922 ~ 71692164 (+) True G1483989
TU1696975 lncRNA downstream 252444 71770807 ~ 71776235 (+) True G1484054
LOC110494500 mRNA upstream 330171 71172013 ~ 71173244 (+) True LOC110494500
XM_036950562.1 mRNA upstream 641288 70855148 ~ 70862127 (+) False slc2a9l1
XM_036950561.1 mRNA upstream 641288 70855159 ~ 70862127 (+) False slc2a9l1
XM_021569612.2 mRNA upstream 641288 70855410 ~ 70862127 (+) False slc2a9l1
XM_036950559.1 mRNA upstream 656025 70809971 ~ 70847390 (+) False LOC110494494
XM_021569629.2 mRNA downstream 152292 71670655 ~ 71678016 (+) False kbtbd8
XM_021567510.2 mRNA downstream 160026 71678389 ~ 71688655 (+) False LOC110493246
XM_036950572.1 mRNA downstream 160220 71678583 ~ 71688655 (+) False LOC110493246
XM_036950573.1 mRNA downstream 160220 71678583 ~ 71688655 (+) True LOC110493246
XR_005037244.1 mRNA downstream 184282 71702645 ~ 71702701 (+) True LOC118940657
TU1696516 other upstream 121143 71381944 ~ 71382272 (+) True G1483638
TU1696175 other upstream 322986 71178513 ~ 71180429 (+) True G1483346
TU1695603 other upstream 662185 70839620 ~ 70841230 (+) True LOC110494494
TU1695519 other upstream 847358 70650943 ~ 70656057 (+) True nampt2
TU1692848 other upstream 2504232 68994632 ~ 68999183 (+) True G1480254
TU1697747 other downstream 786360 72304723 ~ 72305412 (+) True G1484782
TU1697884 other downstream 936200 72454563 ~ 72454924 (+) True G1484897
TU1698249 other downstream 1526374 73044737 ~ 73045588 (+) True LOC110494525
TU1698303 other downstream 1604463 73122826 ~ 73125356 (+) True G1485260
TU1698921 other downstream 1762897 73281260 ~ 73282019 (+) True G1485819

Expression Profile