Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021569976.2 |
| length | 1328 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 6 |
| gene id | LOC110494687 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 81008457 ~ 81014990 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006886 | intracellular protein transport | biological_process |
| GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0015450 | P-P-bond-hydrolysis-driven protein transmembrane transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1708773 | lncRNA | upstream | 13075 | 80995056 ~ 80996466 (+) | True | G1494744 |
| TU1708774 | lncRNA | upstream | 14665 | 80994441 ~ 80994876 (+) | True | G1494745 |
| TU1708778 | lncRNA | upstream | 29029 | 80979610 ~ 80980512 (+) | True | G1494749 |
| TU1708748 | lncRNA | upstream | 112221 | 80897081 ~ 80897320 (+) | True | G1494724 |
| TU1708652 | lncRNA | upstream | 125860 | 80882464 ~ 80883681 (+) | True | G1494634 |
| TU1708809 | lncRNA | downstream | 11598 | 81026588 ~ 81026979 (+) | True | G1494778 |
| TU1708816 | lncRNA | downstream | 23825 | 81038815 ~ 81039760 (+) | True | G1494784 |
| TU1708800 | lncRNA | downstream | 30569 | 81045559 ~ 81045798 (+) | True | G1494769 |
| TU1708824 | lncRNA | downstream | 40216 | 81055206 ~ 81055428 (+) | True | G1494792 |
| TU1708825 | lncRNA | downstream | 40990 | 81055980 ~ 81056188 (+) | True | G1494793 |
| XM_021569973.2 | mRNA | upstream | 4806 | 80997864 ~ 81004735 (+) | True | lmod1b |
| XM_021569972.2 | mRNA | upstream | 16014 | 80983250 ~ 80993527 (+) | True | LOC110494685 |
| XM_036950746.1 | mRNA | upstream | 31102 | 80947799 ~ 80978439 (+) | True | LOC110493271 |
| LOC110494684 | mRNA | upstream | 71813 | 80892208 ~ 80937728 (+) | True | LOC110494684 |
| XM_036950741.1 | mRNA | upstream | 334616 | 80603200 ~ 80674925 (+) | True | uba7 |
| XM_021569977.2 | mRNA | downstream | 3040 | 81018030 ~ 81042619 (+) | True | LOC110494688 |
| XM_021569985.2 | mRNA | downstream | 269096 | 81284086 ~ 81313260 (+) | True | LOC110494691 |
| XM_021569986.2 | mRNA | downstream | 308577 | 81323567 ~ 81335099 (+) | True | LOC110494692 |
| XM_021569988.2 | mRNA | downstream | 359543 | 81374533 ~ 81380787 (+) | True | LOC110494694 |
| XR_005036710.1 | mRNA | downstream | 377712 | 81392702 ~ 81393600 (+) | True | LOC118940108 |
| TU1707042 | other | upstream | 1624104 | 79382645 ~ 79385437 (+) | False | tusc2 |
| TU1707040 | other | upstream | 1624104 | 79383795 ~ 79385437 (+) | False | tusc2 |
| TU1707041 | other | upstream | 1624104 | 79383795 ~ 79385437 (+) | True | tusc2 |
| TU1707053 | other | upstream | 1673469 | 79329619 ~ 79336072 (+) | True | LOC110493267 |
| TU1706085 | other | upstream | 2233814 | 78773229 ~ 78775727 (+) | True | G1492310 |
| TU1709446 | other | downstream | 278450 | 81293440 ~ 81293926 (+) | True | G1495346 |
| TU1709462 | other | downstream | 322027 | 81337017 ~ 81338163 (+) | True | G1495362 |
| TU1709526 | other | downstream | 417221 | 81432211 ~ 81602157 (+) | True | LOC110494696 |
| TU1710167 | other | downstream | 813742 | 81828732 ~ 81833101 (+) | False | LOC110494698 |
| TU1710572 | other | downstream | 1148216 | 82163206 ~ 82169750 (+) | False | G1496351 |
