RNA id: trnae-uuc-8


Basic Information

Item Value
RNA id trnae-uuc-8
length 72
RNA type mRNA
GC content 0.54
exon number 1
gene id trnae-uuc-8
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 83438085 ~ 83438156 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tcccatatggtctagcggttaggattcctggttttcacccaggtggcccgggttcaactcccggtatgggaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1712316 lncRNA upstream 5963 83431862 ~ 83432122 (+) True G1497906
TU1711903 lncRNA upstream 19830 83417937 ~ 83418255 (+) True G1497539
TU1711900 lncRNA upstream 28123 83409697 ~ 83409962 (+) True G1497536
TU1711892 lncRNA upstream 36854 83400521 ~ 83401231 (+) True G1497528
TU1711881 lncRNA upstream 54337 83383532 ~ 83383748 (+) True G1497517
TU1712348 lncRNA downstream 14696 83452852 ~ 83460842 (+) True G1497934
TU1712354 lncRNA downstream 21182 83459338 ~ 83470768 (+) False G1497938
TU1712353 lncRNA downstream 24709 83462865 ~ 83468555 (+) True G1497938
TU1712327 lncRNA downstream 72956 83511112 ~ 83518955 (+) True G1497916
TU1712364 lncRNA downstream 90446 83528602 ~ 83528822 (+) True G1497947
XM_036950779.1 mRNA upstream 126721 83269647 ~ 83311364 (+) False LOC110494727
XM_036950782.1 mRNA upstream 126721 83288678 ~ 83311364 (+) False LOC110494727
XM_036950783.1 mRNA upstream 126721 83290124 ~ 83311364 (+) False LOC110494727
XM_036950780.1 mRNA upstream 126721 83290125 ~ 83311364 (+) False LOC110494727
XM_036950781.1 mRNA upstream 126721 83295118 ~ 83311364 (+) False LOC110494727
trnae-uuc-9 mRNA downstream 1269 83439425 ~ 83439496 (+) True trnae-uuc-9
trnar-acg-8 mRNA downstream 2325 83440481 ~ 83440553 (+) True trnar-acg-8
trnae-uuc-10 mRNA downstream 2608 83440764 ~ 83440835 (+) True trnae-uuc-10
trnar-acg-9 mRNA downstream 3664 83441820 ~ 83441892 (+) True trnar-acg-9
trnae-uuc-11 mRNA downstream 3942 83442098 ~ 83442169 (+) True trnae-uuc-11
TU1710572 other upstream 1268335 82163206 ~ 82169750 (+) False G1496351
TU1710167 other upstream 1604984 81828732 ~ 81833101 (+) False LOC110494698
TU1709526 other upstream 1835928 81432211 ~ 81602157 (+) True LOC110494696
TU1709462 other upstream 2099922 81337017 ~ 81338163 (+) True G1495362
TU1709446 other upstream 2144159 81293440 ~ 81293926 (+) True G1495346
TU1712329 other downstream 176109 83614265 ~ 83634495 (+) True G1497918
TU1712638 other downstream 441776 83879932 ~ 83881188 (+) True LOC110494749
TU1713169 other downstream 687681 84125837 ~ 84174177 (+) True G1498583
TU1713567 other downstream 1057773 84495929 ~ 84497398 (+) True G1498913
TU1713556 other downstream 1077961 84516117 ~ 84517180 (+) False G1498912