RNA id: trnar-acg-15


Basic Information

Item Value
RNA id trnar-acg-15
length 73
RNA type mRNA
GC content 0.56
exon number 1
gene id trnar-acg-15
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 83455799 ~ 83455871 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gggccagtggcgcaatggataacgtgtctgactacggatcagaagattctaggttcgactcctggctggctcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1712316 lncRNA upstream 23677 83431862 ~ 83432122 (+) True G1497906
TU1711903 lncRNA upstream 37544 83417937 ~ 83418255 (+) True G1497539
TU1711900 lncRNA upstream 45837 83409697 ~ 83409962 (+) True G1497536
TU1711892 lncRNA upstream 54568 83400521 ~ 83401231 (+) True G1497528
TU1711881 lncRNA upstream 72051 83383532 ~ 83383748 (+) True G1497517
TU1712354 lncRNA downstream 3467 83459338 ~ 83470768 (+) False G1497938
TU1712353 lncRNA downstream 6994 83462865 ~ 83468555 (+) True G1497938
TU1712327 lncRNA downstream 55241 83511112 ~ 83518955 (+) True G1497916
TU1712364 lncRNA downstream 72731 83528602 ~ 83528822 (+) True G1497947
TU1712334 lncRNA downstream 106676 83562547 ~ 83563062 (+) True LOC110494735
trnae-uuc-17 mRNA upstream 319 83455409 ~ 83455480 (+) True trnae-uuc-17
trnae-uuc-16 mRNA upstream 1337 83454391 ~ 83454462 (+) True trnae-uuc-16
trnae-uuc-15 mRNA upstream 2670 83453058 ~ 83453129 (+) True trnae-uuc-15
trnae-uuc-14 mRNA upstream 4001 83451727 ~ 83451798 (+) True trnae-uuc-14
trnar-acg-14 mRNA upstream 4277 83451450 ~ 83451522 (+) True trnar-acg-14
trnar-acg-16 mRNA downstream 955 83456826 ~ 83456898 (+) True trnar-acg-16
trnae-uuc-18 mRNA downstream 1231 83457102 ~ 83457173 (+) True trnae-uuc-18
trnar-acg-17 mRNA downstream 1971 83457842 ~ 83457914 (+) True trnar-acg-17
trnae-uuc-19 mRNA downstream 2254 83458125 ~ 83458196 (+) True trnae-uuc-19
trnae-uuc-20 mRNA downstream 3284 83459155 ~ 83459226 (+) True trnae-uuc-20
TU1710572 other upstream 1286049 82163206 ~ 82169750 (+) False G1496351
TU1710167 other upstream 1622698 81828732 ~ 81833101 (+) False LOC110494698
TU1709526 other upstream 1853642 81432211 ~ 81602157 (+) True LOC110494696
TU1709462 other upstream 2117636 81337017 ~ 81338163 (+) True G1495362
TU1709446 other upstream 2161873 81293440 ~ 81293926 (+) True G1495346
TU1712329 other downstream 158394 83614265 ~ 83634495 (+) True G1497918
TU1712638 other downstream 424061 83879932 ~ 83881188 (+) True LOC110494749
TU1713169 other downstream 669966 84125837 ~ 84174177 (+) True G1498583
TU1713567 other downstream 1040058 84495929 ~ 84497398 (+) True G1498913
TU1713556 other downstream 1060246 84516117 ~ 84517180 (+) False G1498912