Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1712406 |
| length | 603 |
| lncRNA type | sense_over |
| GC content | 0.34 |
| exon number | 1 |
| gene id | LOC110494741 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 83642445 ~ 83701923 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1712425 | lncRNA | upstream | 11432 | 83687666 ~ 83689358 (+) | True | G1498007 |
| TU1712396 | lncRNA | upstream | 78182 | 83618856 ~ 83622608 (+) | True | G1497978 |
| TU1712395 | lncRNA | upstream | 92582 | 83607724 ~ 83608208 (+) | True | G1497977 |
| TU1712392 | lncRNA | upstream | 94924 | 83605658 ~ 83605866 (+) | True | G1497974 |
| TU1712334 | lncRNA | upstream | 137728 | 83562547 ~ 83563062 (+) | True | LOC110494735 |
| TU1712407 | lncRNA | downstream | 1074 | 83702466 ~ 83702810 (+) | True | G1497989 |
| TU1712576 | lncRNA | downstream | 2827 | 83704219 ~ 83748099 (+) | False | LOC110493277 |
| TU1712606 | lncRNA | downstream | 46996 | 83748388 ~ 83748612 (+) | True | G1498156 |
| TU1712615 | lncRNA | downstream | 56868 | 83758260 ~ 83758572 (+) | True | G1498161 |
| TU1712625 | lncRNA | downstream | 68899 | 83770291 ~ 83770570 (+) | True | G1498171 |
| XM_021570064.2 | mRNA | upstream | 69933 | 83629188 ~ 83630857 (+) | False | LOC110494740 |
| XM_021570063.2 | mRNA | upstream | 69933 | 83629195 ~ 83630857 (+) | True | LOC110494740 |
| XM_021570059.2 | mRNA | upstream | 91902 | 83603639 ~ 83608888 (+) | True | irak1bp1 |
| XM_021570058.2 | mRNA | upstream | 105249 | 83592762 ~ 83595541 (+) | True | hesx1 |
| XM_036950787.1 | mRNA | upstream | 108171 | 83576027 ~ 83592619 (+) | True | LOC110494736 |
| XM_036950798.1 | mRNA | downstream | 2771 | 83704163 ~ 83809312 (+) | False | LOC110493277 |
| XM_036950800.1 | mRNA | downstream | 35105 | 83736497 ~ 83809312 (+) | False | LOC110493277 |
| XM_036950799.1 | mRNA | downstream | 75682 | 83777074 ~ 83809312 (+) | False | LOC110493277 |
| XM_036950792.1 | mRNA | downstream | 109366 | 83810758 ~ 83837755 (+) | False | LOC110494743 |
| XM_036950791.1 | mRNA | downstream | 109367 | 83810759 ~ 83837755 (+) | True | LOC110494743 |
| TU1712329 | other | upstream | 66295 | 83614265 ~ 83634495 (+) | True | G1497918 |
| TU1710572 | other | upstream | 1531040 | 82163206 ~ 82169750 (+) | False | G1496351 |
| TU1710167 | other | upstream | 1867689 | 81828732 ~ 81833101 (+) | False | LOC110494698 |
| TU1709526 | other | upstream | 2098633 | 81432211 ~ 81602157 (+) | True | LOC110494696 |
| TU1709462 | other | upstream | 2362627 | 81337017 ~ 81338163 (+) | True | G1495362 |
| TU1712638 | other | downstream | 178540 | 83879932 ~ 83881188 (+) | True | LOC110494749 |
| TU1713169 | other | downstream | 424445 | 84125837 ~ 84174177 (+) | True | G1498583 |
| TU1713567 | other | downstream | 794537 | 84495929 ~ 84497398 (+) | True | G1498913 |
| TU1713556 | other | downstream | 814725 | 84516117 ~ 84517180 (+) | False | G1498912 |
| TU1713565 | other | downstream | 826373 | 84527765 ~ 84554229 (+) | False | G1498912 |
