Item | Value |
---|---|
RNA id | TCONS_00046586 |
length | 460 |
RNA type | processed_transcript |
GC content | 0.47 |
exon number | 6 |
gene id | XLOC_023560 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007135.7 |
NCBI id | CM002908.2 |
chromosome length | 42172926 |
location | 31310640 ~ 31332087 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006635 | fatty acid beta-oxidation | biological_process |
GO:0042760 | very long-chain fatty acid catabolic process | biological_process |
GO:0015910 | long-chain fatty acid import into peroxisome | biological_process |
GO:0007031 | peroxisome organization | biological_process |
GO:0055085 | transmembrane transport | biological_process |
GO:0005777 | peroxisome | cellular_component |
GO:0005778 | peroxisomal membrane | cellular_component |
GO:0016020 | membrane | cellular_component |
GO:0016021 | integral component of membrane | cellular_component |
GO:0005524 | ATP binding | molecular_function |
GO:0042803 | protein homodimerization activity | molecular_function |
GO:0000166 | nucleotide binding | molecular_function |
GO:0016887 | ATPase activity | molecular_function |
GO:0042626 | ATPase-coupled transmembrane transporter activity | molecular_function |
GO:0005324 | long-chain fatty acid transporter activity | molecular_function |
id | description |
---|---|
ZDB-GENE-040426-2868 | Predicted to enable ATP binding activity; ATPase-coupled transmembrane transporter activity; and long-chain fatty acid transporter activity. Predicted to be involved in fatty acid catabolic process; long-chain fatty acid import into peroxisome; and peroxisome organization. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane and peroxisome. Predicted to be integral component of membrane. Predicted to be active in peroxisomal membrane. Human ortholog(s) of this gene implicated in Zellweger syndrome and congenital bile acid synthesis defect 5. Orthologous to human ABCD3 (ATP binding cassette subfamily D member 3). |
ensembl_id | ENSDART00000169556 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00046578 | lncRNA | downstream | 222504 | 31098534 ~ 31100851 (-) | False | XLOC_023556 |
TCONS_00046574 | lncRNA | downstream | 241922 | 31055418 ~ 31081433 (-) | True | XLOC_023554 |
TCONS_00046875 | lncRNA | downstream | 246826 | 31040020 ~ 31076529 (-) | False | XLOC_023554 |
TCONS_00046874 | lncRNA | downstream | 350492 | 30927688 ~ 30972863 (-) | True | XLOC_023553 |
TCONS_00046873 | lncRNA | downstream | 411490 | 30903443 ~ 30911865 (-) | True | XLOC_023552 |
TCONS_00046876 | lncRNA | upstream | 123173 | 31455086 ~ 31458194 (-) | False | XLOC_023563 |
TCONS_00047218 | lncRNA | upstream | 125175 | 31457088 ~ 31457818 (-) | False | XLOC_023563 |
TCONS_00047219 | lncRNA | upstream | 125175 | 31457088 ~ 31457834 (-) | False | XLOC_023563 |
TCONS_00047220 | lncRNA | upstream | 125175 | 31457088 ~ 31457843 (-) | True | XLOC_023563 |
TCONS_00047221 | lncRNA | upstream | 377588 | 31709501 ~ 31717481 (-) | True | XLOC_023565 |
TCONS_00046584 | mRNA | downstream | 16631 | 31294019 ~ 31306724 (-) | True | XLOC_023559 |
TCONS_00046582 | mRNA | downstream | 100123 | 31201195 ~ 31223232 (-) | False | XLOC_023558 |
TCONS_00046581 | mRNA | downstream | 128508 | 31170362 ~ 31194847 (-) | True | XLOC_023557 |
TCONS_00046579 | mRNA | downstream | 182999 | 31098558 ~ 31140356 (-) | False | XLOC_023556 |
TCONS_00046580 | mRNA | downstream | 199990 | 31116614 ~ 31123365 (-) | True | XLOC_023556 |
TCONS_00046587 | mRNA | upstream | 70981 | 31402894 ~ 31422574 (-) | False | XLOC_023561 |
TCONS_00046588 | mRNA | upstream | 74461 | 31406374 ~ 31425799 (-) | True | XLOC_023561 |
TCONS_00046589 | mRNA | upstream | 98977 | 31430890 ~ 31452923 (-) | False | XLOC_023562 |
TCONS_00046590 | mRNA | upstream | 99509 | 31431422 ~ 31439841 (-) | False | XLOC_023562 |
TCONS_00046591 | mRNA | upstream | 99509 | 31431422 ~ 31452875 (-) | True | XLOC_023562 |
TCONS_00046583 | other | downstream | 100172 | 31218823 ~ 31223183 (-) | True | XLOC_023558 |
TCONS_00046577 | other | downstream | 232407 | 31084689 ~ 31090948 (-) | True | XLOC_023555 |
TCONS_00046564 | other | downstream | 1326165 | 29964976 ~ 29997190 (-) | True | XLOC_023547 |
TCONS_00046553 | other | downstream | 1849380 | 29473856 ~ 29473975 (-) | True | XLOC_023538 |
TCONS_00046552 | other | downstream | 2270529 | 29052708 ~ 29052826 (-) | True | XLOC_023537 |
TCONS_00046592 | other | upstream | 308399 | 31640312 ~ 31640427 (-) | True | XLOC_023564 |
TCONS_00046593 | other | upstream | 454550 | 31786463 ~ 31786577 (-) | True | XLOC_023567 |
TCONS_00046605 | other | upstream | 841225 | 32173138 ~ 32196412 (-) | True | XLOC_023573 |
TCONS_00046633 | other | upstream | 2780843 | 34112756 ~ 34115514 (-) | True | XLOC_023597 |
TCONS_00046660 | other | upstream | 4963398 | 36295311 ~ 36300996 (-) | True | XLOC_023621 |