RNA id: TU1631690


Basic Information

Item Value
RNA id TU1631690
length 602
lncRNA type intronic
GC content 0.31
exon number 1
gene id G1425210
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 17589163 ~ 17589764 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagagagaaagaaagaaagaaagaaagagagaaagaaagaaagagagacagaaagaaagaaagaaagaaagagagaaagaaagaaagaaagagagaaagaaagaaagagagaaagaaagaaagaaagagagaaagagagaaagaaagaaagaaagaaagagagaaagaaagaaagaaagagagaaagaaagaaagagagacagaaagaaagaaagagagaaagagagaaagaaagaaagaaagaaagaaagagagaaagaaagaaagaaagagagaaagaaagaaagagagacagaaagaaagaaagaaaaaagaaagaaagaaagagagaaagaaagaaagaaagagagaaagaaagaaagaaagagagaaagagagaaagaaagaaagaaagaaagaaagagagaaagaaagaaagaaagagagacagaaagaaagaaagaaagaaagaaagagagaaagaaagaaagaaagagagaaagaaagaaagagagaaagaaagaaagagagagagaaagaaagagagacagaaagaaagaaagaaagaaagaaagagagaaagaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1631687 lncRNA downstream 2116 17585893 ~ 17587047 (-) True G1425208
TU1631685 lncRNA downstream 5518 17583321 ~ 17583645 (-) True G1425206
TU1631684 lncRNA downstream 8796 17580121 ~ 17580367 (-) True G1425205
TU1630969 lncRNA downstream 52821 17501059 ~ 17536342 (-) True G1424589
TU1630925 lncRNA downstream 121473 17464450 ~ 17467690 (-) True G1424553
TU1631691 lncRNA upstream 2957 17592721 ~ 17592928 (-) True G1425211
TU1631693 lncRNA upstream 6735 17596499 ~ 17596716 (-) True G1425213
TU1631697 lncRNA upstream 15388 17605152 ~ 17605381 (-) True G1425217
TU1631698 lncRNA upstream 16342 17606106 ~ 17606341 (-) True G1425218
TU1631699 lncRNA upstream 16780 17606544 ~ 17608785 (-) True G1425219
XM_036949170.1 mRNA downstream 287966 17296873 ~ 17301197 (-) True LOC110526262
XM_036949169.1 mRNA downstream 292528 17279858 ~ 17296635 (-) True LOC118940342
XM_036949167.1 mRNA downstream 340615 17238126 ~ 17248548 (-) True LOC110526382
XM_036949166.1 mRNA downstream 340617 17237261 ~ 17248546 (-) False LOC110526382
XM_036948342.1 mRNA downstream 442234 17142063 ~ 17146929 (-) True LOC110495065
XM_036949173.1 mRNA upstream 133514 17723278 ~ 17727642 (-) True LOC118940344
XM_036949177.1 mRNA upstream 330457 17920221 ~ 17929855 (-) True LOC118940345
XM_036949178.1 mRNA upstream 629595 18219359 ~ 18239809 (-) False LOC118940346
XM_036949188.1 mRNA upstream 692663 18282427 ~ 18299113 (-) False LOC118936554
XM_036949186.1 mRNA upstream 692663 18282427 ~ 18302307 (-) False LOC118936554
TU1630918 other downstream 131659 17456929 ~ 17457504 (-) True G1424547
TU1630535 other downstream 620808 16963630 ~ 16968355 (-) True LOC110494935
TU1630482 other downstream 650464 16855477 ~ 16938699 (-) True G1424218
TU1630504 other downstream 737677 16850751 ~ 16851486 (-) True G1424227
TU1630513 other downstream 816206 16770437 ~ 16772957 (-) True G1424234
TU1631836 other upstream 319301 17909065 ~ 17911376 (-) True G1425321
TU1631959 other upstream 730167 18319931 ~ 18326899 (-) True G1425419
TU1631960 other upstream 769829 18359593 ~ 18363136 (-) False LOC110487190
TU1631963 other upstream 769829 18359593 ~ 18363136 (-) False LOC110487190
TU1631967 other upstream 779686 18369450 ~ 18373702 (-) True LOC110487190

Expression Profile