RNA id: TU1631698



Basic Information


Item Value
RNA id TU1631698
length 236
lncRNA type intronic
GC content 0.42
exon number 1
gene id G1425218
representative True

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 17606106 ~ 17606341 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aaaaagagggagggatgggagaaagagagaaagggagagagagagaagtgaagagagagagagatagagaaataaagagagagaaaataaaaacaatgaagagagggtgaaagatggagagagagagagagagagatagatggatggacagatgatGTCAGGTTAAGGCGAGACCTCTCActactgttctctctgtgtgtactgCACTACATCTAGCATAGTATGTAaagtatgcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1631697 lncRNA downstream 725 17605152 ~ 17605381 (-) True G1425217
TU1631693 lncRNA downstream 9390 17596499 ~ 17596716 (-) True G1425213
TU1631691 lncRNA downstream 13178 17592721 ~ 17592928 (-) True G1425211
TU1631690 lncRNA downstream 16342 17589163 ~ 17589764 (-) True G1425210
TU1631687 lncRNA downstream 19059 17585893 ~ 17587047 (-) True G1425208
TU1631699 lncRNA upstream 203 17606544 ~ 17608785 (-) True G1425219
TU1631703 lncRNA upstream 7188 17613529 ~ 17613821 (-) True G1425222
TU1631705 lncRNA upstream 14006 17620347 ~ 17622476 (-) True G1425224
TU1631706 lncRNA upstream 16291 17622632 ~ 17622965 (-) True G1425225
TU1631707 lncRNA upstream 16734 17623075 ~ 17623507 (-) True G1425226
XM_036949170.1 mRNA downstream 304909 17296873 ~ 17301197 (-) True LOC110526262
XM_036949169.1 mRNA downstream 309471 17279858 ~ 17296635 (-) True LOC118940342
XM_036949167.1 mRNA downstream 357558 17238126 ~ 17248548 (-) True LOC110526382
XM_036949166.1 mRNA downstream 357560 17237261 ~ 17248546 (-) False LOC110526382
XM_036948342.1 mRNA downstream 459177 17142063 ~ 17146929 (-) True LOC110495065
XM_036949173.1 mRNA upstream 116937 17723278 ~ 17727642 (-) True LOC118940344
XM_036949177.1 mRNA upstream 313880 17920221 ~ 17929855 (-) True LOC118940345
XM_036949178.1 mRNA upstream 613018 18219359 ~ 18239809 (-) False LOC118940346
XM_036949188.1 mRNA upstream 676086 18282427 ~ 18299113 (-) False LOC118936554
XM_036949186.1 mRNA upstream 676086 18282427 ~ 18302307 (-) False LOC118936554
TU1630918 other downstream 148602 17456929 ~ 17457504 (-) True G1424547
TU1630535 other downstream 637751 16963630 ~ 16968355 (-) True LOC110494935
TU1630482 other downstream 667407 16855477 ~ 16938699 (-) True G1424218
TU1630504 other downstream 754620 16850751 ~ 16851486 (-) True G1424227
TU1630513 other downstream 833149 16770437 ~ 16772957 (-) True G1424234
TU1631836 other upstream 302724 17909065 ~ 17911376 (-) True G1425321
TU1631959 other upstream 713590 18319931 ~ 18326899 (-) True G1425419
TU1631960 other upstream 753252 18359593 ~ 18363136 (-) False LOC110487190
TU1631963 other upstream 753252 18359593 ~ 18363136 (-) False LOC110487190
TU1631967 other upstream 763109 18369450 ~ 18373702 (-) True LOC110487190

Expression Profile