RNA id: TU1632223



Basic Information


Item Value
RNA id TU1632223
length 209
lncRNA type intronic
GC content 0.43
exon number 2
gene id G1425661
representative True

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 18648129 ~ 18648554 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gacctaatatagtgtataagaggtcaggctgggcctaatatagtgtataagaggtcaggctggacctaatatagtgtataagaggtcaggctgggcctaatatagtgtataagaggacaggctgggcctaatatagtgtataagaggacaggctggacctaatatagtgtataagaggacaggctggacctaatatagtgtataagagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1632220 lncRNA downstream 8373 18639531 ~ 18639756 (-) True G1425658
TU1632219 lncRNA downstream 10152 18637684 ~ 18637977 (-) True G1425657
TU1632218 lncRNA downstream 11982 18635625 ~ 18636147 (-) True G1425656
TU1632216 lncRNA downstream 19425 18628453 ~ 18628704 (-) True G1425654
TU1632215 lncRNA downstream 20094 18627825 ~ 18628035 (-) True G1425653
TU1632233 lncRNA upstream 13696 18662250 ~ 18662554 (-) True G1425667
TU1632234 lncRNA upstream 14817 18663371 ~ 18663589 (-) True G1425668
TU1632235 lncRNA upstream 15821 18664375 ~ 18664604 (-) True G1425669
TU1632237 lncRNA upstream 18241 18666795 ~ 18667080 (-) True G1425671
TU1632238 lncRNA upstream 18765 18667319 ~ 18667589 (-) True G1425672
XM_036948345.1 mRNA downstream 154009 18361725 ~ 18494120 (-) False LOC110487190
XM_036949203.1 mRNA downstream 301621 18327660 ~ 18346508 (-) True LOC110511293
XM_036949187.1 mRNA downstream 344245 18282427 ~ 18303884 (-) False LOC118936554
XM_036949189.1 mRNA downstream 345193 18282427 ~ 18302936 (-) False LOC118936554
XM_036949186.1 mRNA downstream 345822 18282427 ~ 18302307 (-) False LOC118936554
XM_036949209.1 mRNA upstream 64675 18713229 ~ 18716461 (-) False LOC110485574
XM_036949208.1 mRNA upstream 72404 18720958 ~ 18721917 (-) True LOC118940349
XM_036949219.1 mRNA upstream 300901 18949455 ~ 18980894 (-) True LOC110514184
XM_036949221.1 mRNA upstream 380524 19029078 ~ 19032029 (-) False LOC110485553
XM_021556652.2 mRNA upstream 380524 19029078 ~ 19032742 (-) True LOC110485553
TU1632214 other downstream 21088 18625756 ~ 18627041 (-) True G1425652
TU1631967 other downstream 274427 18369450 ~ 18373702 (-) True LOC110487190
TU1631960 other downstream 284993 18359593 ~ 18363136 (-) False LOC110487190
TU1631963 other downstream 284993 18359593 ~ 18363136 (-) False LOC110487190
TU1631959 other downstream 321230 18319931 ~ 18326899 (-) True G1425419
TU1632273 other upstream 64675 18713229 ~ 18716384 (-) True LOC110485574
TU1632337 other upstream 217636 18866190 ~ 18866932 (-) True G1425753
TU1632428 other upstream 405320 19053874 ~ 19061393 (-) True LOC110485549
TU1632630 other upstream 520826 19169380 ~ 19172677 (-) True G1425986
TU1633244 other upstream 1151155 19799709 ~ 19803564 (-) False G1426504

Expression Profile