RNA id: TU1632323



Basic Information


Item Value
RNA id TU1632323
length 261
lncRNA type antisense_over
GC content 0.52
exon number 1
gene id G1425739
representative True

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 18839051 ~ 18839311 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCCAGAATAGCCTGGCCTACAGAGATCTAACTCTTTCTCCCACCTGTATATCTATGGTGTTGTAGAGTCCCTGTGCTCTAGCAGAGTCCCCCAGAATAGCCTGGCCTACAGAGATCTAACTCTTTCTCCCACCTGTATATCTATGGTGTTGTAGAGTCCCTGTGCCCGGGCAGAGCCCCCCAGAATAGCCTGGCCTACAGAGATGTGGACATCAGAGTGGATGTTGATCCCATCACGTCTGAACACTGGACTCCTCTGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1632321 lncRNA downstream 1007 18837750 ~ 18838044 (-) False G1425738
TU1632322 lncRNA downstream 1007 18837750 ~ 18838044 (-) True G1425738
TU1632316 lncRNA downstream 7722 18831110 ~ 18831329 (-) True G1425733
TU1632314 lncRNA downstream 9374 18829178 ~ 18829677 (-) True G1425731
TU1632256 lncRNA downstream 12377 18758115 ~ 18826674 (-) False G1425681
TU1632324 lncRNA upstream 28 18839339 ~ 18839576 (-) True G1425740
TU1632325 lncRNA upstream 413 18839724 ~ 18839979 (-) True G1425741
TU1632326 lncRNA upstream 756 18840067 ~ 18840343 (-) True G1425742
TU1632328 lncRNA upstream 1433 18840744 ~ 18840960 (-) True G1425744
TU1632332 lncRNA upstream 12434 18851745 ~ 18852102 (-) True G1425748
XM_036949208.1 mRNA downstream 117134 18720958 ~ 18721917 (-) True LOC118940349
XM_036949209.1 mRNA downstream 122590 18713229 ~ 18716461 (-) False LOC110485574
XM_036949204.1 mRNA downstream 131925 18564334 ~ 18707126 (-) True LOC118940348
XM_036948345.1 mRNA downstream 344931 18361725 ~ 18494120 (-) False LOC110487190
XM_036949203.1 mRNA downstream 492543 18327660 ~ 18346508 (-) True LOC110511293
XM_036949219.1 mRNA upstream 110144 18949455 ~ 18980894 (-) True LOC110514184
XM_036949221.1 mRNA upstream 189767 19029078 ~ 19032029 (-) False LOC110485553
XM_021556652.2 mRNA upstream 189767 19029078 ~ 19032742 (-) True LOC110485553
XM_036949220.1 mRNA upstream 196514 19035825 ~ 19050381 (-) True LOC118940350
XM_036949222.1 mRNA upstream 211414 19050725 ~ 19093965 (-) False LOC110485549
TU1632273 other downstream 122667 18713229 ~ 18716384 (-) True LOC110485574
TU1632214 other downstream 212010 18625756 ~ 18627041 (-) True G1425652
TU1631967 other downstream 465349 18369450 ~ 18373702 (-) True LOC110487190
TU1631960 other downstream 475915 18359593 ~ 18363136 (-) False LOC110487190
TU1632337 other upstream 26879 18866190 ~ 18866932 (-) True G1425753
TU1632428 other upstream 214563 19053874 ~ 19061393 (-) True LOC110485549
TU1632630 other upstream 330069 19169380 ~ 19172677 (-) True G1425986
TU1633244 other upstream 960398 19799709 ~ 19803564 (-) False G1426504
TU1633235 other upstream 962517 19801828 ~ 19803564 (-) False G1426504

Expression Profile