Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1632791 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1426130 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 19454848 ~ 19455061 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1632771 | lncRNA | downstream | 22544 | 19419049 ~ 19432304 (-) | False | cxcl12b |
| TU1632772 | lncRNA | downstream | 22544 | 19419049 ~ 19432304 (-) | True | cxcl12b |
| TU1632776 | lncRNA | downstream | 48079 | 19401670 ~ 19406769 (-) | True | G1426115 |
| TU1632752 | lncRNA | downstream | 92595 | 19361714 ~ 19362253 (-) | True | G1426093 |
| TU1632740 | lncRNA | downstream | 110796 | 19343835 ~ 19344052 (-) | True | LOC110485544 |
| TU1632793 | lncRNA | upstream | 6899 | 19461960 ~ 19462243 (-) | True | G1426132 |
| TU1632842 | lncRNA | upstream | 57069 | 19512130 ~ 19512332 (-) | True | G1426178 |
| TU1632847 | lncRNA | upstream | 62963 | 19518024 ~ 19518234 (-) | True | G1426183 |
| TU1633126 | lncRNA | upstream | 113490 | 19568551 ~ 19568822 (-) | True | G1426417 |
| TU1633131 | lncRNA | upstream | 127069 | 19582130 ~ 19699901 (-) | True | G1426421 |
| NM_001281409.1 | mRNA | downstream | 22640 | 19422266 ~ 19432208 (-) | False | cxcl12b |
| XM_036949230.1 | mRNA | downstream | 104059 | 19343599 ~ 19350789 (-) | False | LOC110485544 |
| XM_036949229.1 | mRNA | downstream | 104061 | 19343599 ~ 19350787 (-) | False | LOC110485544 |
| XM_021556626.2 | mRNA | downstream | 112340 | 19334332 ~ 19342508 (-) | True | LOC110485530 |
| XM_036949231.1 | mRNA | downstream | 121614 | 19327672 ~ 19333234 (-) | True | LOC110485538 |
| XM_021556628.2 | mRNA | upstream | 45163 | 19500224 ~ 19501417 (-) | True | LOC110485531 |
| XM_036949233.1 | mRNA | upstream | 69776 | 19524837 ~ 19538583 (-) | False | LOC110485541 |
| XM_036949234.1 | mRNA | upstream | 69776 | 19524837 ~ 19539688 (-) | True | LOC110485541 |
| XM_036949235.1 | mRNA | upstream | 85793 | 19540854 ~ 19567888 (-) | False | LOC110487230 |
| XM_036949236.1 | mRNA | upstream | 85793 | 19540854 ~ 19581027 (-) | True | LOC110487230 |
| TU1632630 | other | downstream | 282171 | 19169380 ~ 19172677 (-) | True | G1425986 |
| TU1632428 | other | downstream | 393455 | 19053874 ~ 19061393 (-) | True | LOC110485549 |
| TU1632337 | other | downstream | 587916 | 18866190 ~ 18866932 (-) | True | G1425753 |
| TU1632273 | other | downstream | 738464 | 18713229 ~ 18716384 (-) | True | LOC110485574 |
| TU1632214 | other | downstream | 827807 | 18625756 ~ 18627041 (-) | True | G1425652 |
| TU1633244 | other | upstream | 344648 | 19799709 ~ 19803564 (-) | False | G1426504 |
| TU1633235 | other | upstream | 346767 | 19801828 ~ 19803564 (-) | False | G1426504 |
| TU1633241 | other | upstream | 346767 | 19801828 ~ 19803564 (-) | False | G1426504 |
| TU1633291 | other | upstream | 405240 | 19860301 ~ 19861663 (-) | True | G1426547 |
| TU1633329 | other | upstream | 564568 | 20019629 ~ 20021058 (-) | False | LOC110485621 |
