Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1632842 |
| length | 203 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 1 |
| gene id | G1426178 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 19512130 ~ 19512332 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1632793 | lncRNA | downstream | 49887 | 19461960 ~ 19462243 (-) | True | G1426132 |
| TU1632791 | lncRNA | downstream | 57069 | 19454848 ~ 19455061 (-) | True | G1426130 |
| TU1632771 | lncRNA | downstream | 79826 | 19419049 ~ 19432304 (-) | False | cxcl12b |
| TU1632772 | lncRNA | downstream | 79826 | 19419049 ~ 19432304 (-) | True | cxcl12b |
| TU1632776 | lncRNA | downstream | 105361 | 19401670 ~ 19406769 (-) | True | G1426115 |
| TU1632847 | lncRNA | upstream | 5692 | 19518024 ~ 19518234 (-) | True | G1426183 |
| TU1633126 | lncRNA | upstream | 56219 | 19568551 ~ 19568822 (-) | True | G1426417 |
| TU1633131 | lncRNA | upstream | 69798 | 19582130 ~ 19699901 (-) | True | G1426421 |
| TU1633151 | lncRNA | upstream | 94856 | 19607188 ~ 19609639 (-) | False | G1426437 |
| TU1633152 | lncRNA | upstream | 94856 | 19607188 ~ 19608741 (-) | False | G1426437 |
| XM_021556628.2 | mRNA | downstream | 10713 | 19500224 ~ 19501417 (-) | True | LOC110485531 |
| NM_001281409.1 | mRNA | downstream | 79922 | 19422266 ~ 19432208 (-) | False | cxcl12b |
| XM_036949230.1 | mRNA | downstream | 161341 | 19343599 ~ 19350789 (-) | False | LOC110485544 |
| XM_036949229.1 | mRNA | downstream | 161343 | 19343599 ~ 19350787 (-) | False | LOC110485544 |
| XM_021556626.2 | mRNA | downstream | 169622 | 19334332 ~ 19342508 (-) | True | LOC110485530 |
| XM_036949233.1 | mRNA | upstream | 12505 | 19524837 ~ 19538583 (-) | False | LOC110485541 |
| XM_036949234.1 | mRNA | upstream | 12505 | 19524837 ~ 19539688 (-) | True | LOC110485541 |
| XM_036949235.1 | mRNA | upstream | 28522 | 19540854 ~ 19567888 (-) | False | LOC110487230 |
| XM_036949236.1 | mRNA | upstream | 28522 | 19540854 ~ 19581027 (-) | True | LOC110487230 |
| XM_036949254.1 | mRNA | upstream | 507284 | 20019616 ~ 20021101 (-) | False | LOC110485621 |
| TU1632630 | other | downstream | 339453 | 19169380 ~ 19172677 (-) | True | G1425986 |
| TU1632428 | other | downstream | 450737 | 19053874 ~ 19061393 (-) | True | LOC110485549 |
| TU1632337 | other | downstream | 645198 | 18866190 ~ 18866932 (-) | True | G1425753 |
| TU1632273 | other | downstream | 795746 | 18713229 ~ 18716384 (-) | True | LOC110485574 |
| TU1632214 | other | downstream | 885089 | 18625756 ~ 18627041 (-) | True | G1425652 |
| TU1633244 | other | upstream | 287377 | 19799709 ~ 19803564 (-) | False | G1426504 |
| TU1633235 | other | upstream | 289496 | 19801828 ~ 19803564 (-) | False | G1426504 |
| TU1633241 | other | upstream | 289496 | 19801828 ~ 19803564 (-) | False | G1426504 |
| TU1633291 | other | upstream | 347969 | 19860301 ~ 19861663 (-) | True | G1426547 |
| TU1633329 | other | upstream | 507297 | 20019629 ~ 20021058 (-) | False | LOC110485621 |
