Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1642232 |
| length | 608 |
| lncRNA type | read_through |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G1434466 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 27533666 ~ 27534273 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
27,531,200
27,531,600
27,532,000
27,532,400
27,532,800
27,533,200
27,533,600
27,534,000
27,534,400
27,534,800
27,535,200
27,535,600
27,536,000
27,536,400
NC_048581.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1642228 | lncRNA | upstream | 22267 | 27511175 ~ 27511399 (+) | True | LOC118940372 |
| TU1642222 | lncRNA | upstream | 29627 | 27496067 ~ 27504039 (+) | True | G1434457 |
| TU1642216 | lncRNA | upstream | 43513 | 27489760 ~ 27490153 (+) | True | G1434451 |
| TU1641651 | lncRNA | upstream | 73298 | 27398653 ~ 27460368 (+) | True | G1433955 |
| TU1641688 | lncRNA | upstream | 81696 | 27446241 ~ 27451970 (+) | True | G1433988 |
| TU1642238 | lncRNA | downstream | 9549 | 27543822 ~ 27544078 (+) | False | LOC110493581 |
| TU1642242 | lncRNA | downstream | 13154 | 27547427 ~ 27547644 (+) | True | LOC110493581 |
| TU1642243 | lncRNA | downstream | 15500 | 27549773 ~ 27550015 (+) | False | LOC118940376 |
| TU1642244 | lncRNA | downstream | 16720 | 27550993 ~ 27551327 (+) | False | LOC118940376 |
| TU1642249 | lncRNA | downstream | 20432 | 27554705 ~ 27555402 (+) | True | LOC118940376 |
| XM_036949523.1 | mRNA | upstream | 7689 | 27523481 ~ 27525977 (+) | True | LOC118940373 |
| XM_036949518.1 | mRNA | upstream | 14503 | 27513342 ~ 27519163 (+) | False | LOC118940371 |
| XM_036949519.1 | mRNA | upstream | 14503 | 27513342 ~ 27519163 (+) | False | LOC118940371 |
| XM_036949520.1 | mRNA | upstream | 14503 | 27513342 ~ 27519163 (+) | True | LOC118940371 |
| XM_036949522.1 | mRNA | upstream | 20334 | 27506322 ~ 27513332 (+) | False | LOC118940372 |
| XM_036948359.1 | mRNA | downstream | 8998 | 27543271 ~ 27547668 (+) | False | LOC110493581 |
| XM_036949529.1 | mRNA | downstream | 15254 | 27549527 ~ 27555427 (+) | False | LOC118940376 |
| XM_036949530.1 | mRNA | downstream | 15254 | 27549527 ~ 27555427 (+) | False | LOC118940376 |
| XM_036949531.1 | mRNA | downstream | 15254 | 27549527 ~ 27555427 (+) | False | LOC118940376 |
| XR_005036911.1 | mRNA | downstream | 23070 | 27557343 ~ 27559064 (+) | True | LOC118940378 |
| TU1641606 | other | upstream | 200493 | 27319977 ~ 27333173 (+) | False | LOC110493575 |
| TU1641244 | other | upstream | 848025 | 26683325 ~ 26685641 (+) | False | LOC110493559 |
| TU1641243 | other | upstream | 848025 | 26683375 ~ 26685641 (+) | True | LOC110493559 |
| TU1640082 | other | upstream | 1710403 | 25762966 ~ 25823263 (+) | True | G1432630 |
| TU1637188 | other | upstream | 3668268 | 23863025 ~ 23865398 (+) | True | LOC110493519 |
| TU1642233 | other | downstream | 2922 | 27537195 ~ 27537570 (+) | True | LOC118940374 |
| TU1642237 | other | downstream | 8914 | 27543187 ~ 27543578 (+) | False | LOC110493581 |
| TU1642246 | other | downstream | 19443 | 27553716 ~ 27554209 (+) | False | LOC118940376 |
| TU1642257 | other | downstream | 64224 | 27598497 ~ 27598792 (+) | True | LOC110493582 |
| TU1642325 | other | downstream | 184184 | 27718457 ~ 27718847 (+) | True | G1434530 |
