Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1650933 |
| length | 5331 |
| lncRNA type | antisense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G1442194 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 34471781 ~ 34560447 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
34,553,000
34,554,000
34,555,000
34,556,000
34,557,000
34,558,000
34,559,000
34,560,000
34,561,000
34,562,000
34,563,000
34,564,000
34,565,000
34,566,000
34,567,000
34,568,000
NC_048581.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1650870 | lncRNA | downstream | 86611 | 34446375 ~ 34468485 (-) | True | pgap4 |
| TU1650923 | lncRNA | downstream | 89695 | 34460594 ~ 34465401 (-) | True | G1442188 |
| TU1650907 | lncRNA | downstream | 129152 | 34424954 ~ 34425944 (-) | True | G1442172 |
| TU1650886 | lncRNA | downstream | 187490 | 34367378 ~ 34367606 (-) | True | G1442151 |
| TU1650877 | lncRNA | downstream | 191839 | 34361417 ~ 34363257 (-) | True | ttbk1a |
| TU1650983 | lncRNA | upstream | 2124 | 34562571 ~ 34562802 (-) | True | G1442241 |
| TU1650985 | lncRNA | upstream | 3817 | 34564264 ~ 34564704 (-) | True | G1442243 |
| TU1650929 | lncRNA | upstream | 28906 | 34589353 ~ 34591420 (-) | False | tmem178 |
| TU1650930 | lncRNA | upstream | 28906 | 34589353 ~ 34590000 (-) | False | tmem178 |
| TU1650931 | lncRNA | upstream | 28906 | 34589353 ~ 34590167 (-) | True | tmem178 |
| LOC118940658 | mRNA | downstream | 58427 | 34496620 ~ 34496669 (-) | True | LOC118940658 |
| XM_021568263.2 | mRNA | downstream | 104263 | 34446356 ~ 34450833 (-) | False | pgap4 |
| XM_021568264.2 | mRNA | downstream | 104866 | 34446356 ~ 34450230 (-) | False | pgap4 |
| XM_021568259.2 | mRNA | downstream | 124540 | 34413543 ~ 34430556 (-) | True | tpcn3 |
| XM_036948372.1 | mRNA | downstream | 157409 | 34348767 ~ 34397687 (-) | False | ttbk1a |
| XM_021568272.2 | mRNA | upstream | 30402 | 34590849 ~ 34605067 (-) | False | tmem178 |
| XM_021568273.2 | mRNA | upstream | 30402 | 34590849 ~ 34605070 (-) | False | tmem178 |
| XM_021568283.2 | mRNA | upstream | 225090 | 34785537 ~ 34787269 (-) | False | gemin6 |
| XM_021568284.2 | mRNA | upstream | 225090 | 34785537 ~ 34788361 (-) | True | gemin6 |
| XM_036948373.1 | mRNA | upstream | 253906 | 34814353 ~ 34815153 (-) | True | LOC118940117 |
| TU1650874 | other | downstream | 193790 | 34360102 ~ 34361306 (-) | True | G1442139 |
| TU1649593 | other | downstream | 1138743 | 33413124 ~ 33416353 (-) | True | LOC110493763 |
| TU1649328 | other | downstream | 1168568 | 33385937 ~ 33386528 (-) | True | G1440786 |
| TU1649323 | other | downstream | 1172377 | 33381901 ~ 33382719 (-) | True | G1440781 |
| TU1649246 | other | downstream | 1302717 | 33238621 ~ 33252379 (-) | True | G1440711 |
| TU1651088 | other | upstream | 159980 | 34720427 ~ 34720792 (-) | True | G1442336 |
| TU1651205 | other | upstream | 343635 | 34904082 ~ 34904616 (-) | True | G1442443 |
| TU1651483 | other | upstream | 499752 | 35060199 ~ 35061975 (-) | True | LOC110493800 |
| TU1651773 | other | upstream | 668307 | 35228754 ~ 35232154 (-) | True | G1442932 |
| TU1652432 | other | upstream | 1055257 | 35615704 ~ 35617922 (-) | False | LOC110495171 |
