Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1653172 |
| length | 418 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G1444196 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 36854654 ~ 36855071 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1653134 | lncRNA | upstream | 56438 | 36797769 ~ 36798216 (+) | True | G1444160 |
| TU1653124 | lncRNA | upstream | 73678 | 36780534 ~ 36780976 (+) | True | G1444152 |
| TU1653095 | lncRNA | upstream | 152163 | 36702182 ~ 36702491 (+) | True | G1444123 |
| TU1653094 | lncRNA | upstream | 153341 | 36701073 ~ 36701313 (+) | True | G1444122 |
| TU1653092 | lncRNA | upstream | 158429 | 36695794 ~ 36696225 (+) | True | G1444120 |
| TU1653173 | lncRNA | downstream | 398 | 36855469 ~ 36855805 (+) | True | G1444197 |
| TU1653175 | lncRNA | downstream | 7413 | 36862484 ~ 36862699 (+) | True | G1444199 |
| TU1653176 | lncRNA | downstream | 8427 | 36863498 ~ 36863844 (+) | True | G1444200 |
| TU1653181 | lncRNA | downstream | 14419 | 36869490 ~ 36869764 (+) | True | G1444205 |
| TU1653187 | lncRNA | downstream | 22033 | 36877104 ~ 36877766 (+) | True | G1444209 |
| XM_021568359.2 | mRNA | upstream | 52355 | 36795839 ~ 36802299 (+) | True | LOC110493846 |
| XM_021568356.2 | mRNA | upstream | 84872 | 36723934 ~ 36769782 (+) | True | LOC110493845 |
| XM_021567427.2 | mRNA | upstream | 177908 | 36670778 ~ 36676746 (+) | False | if6 |
| XM_021568367.2 | mRNA | downstream | 96100 | 36951171 ~ 36978642 (+) | False | rbpjl |
| XM_021568368.2 | mRNA | downstream | 96100 | 36951171 ~ 36978642 (+) | True | rbpjl |
| XM_021568370.2 | mRNA | downstream | 174510 | 37029581 ~ 37033137 (+) | True | LOC110493852 |
| XR_005036975.1 | mRNA | downstream | 256181 | 37111252 ~ 37112362 (+) | True | LOC118940422 |
| XR_005036977.1 | mRNA | downstream | 440251 | 37295322 ~ 37301815 (+) | True | LOC118940423 |
| TU1652965 | other | upstream | 296883 | 36543019 ~ 36557771 (+) | True | LOC110493174 |
| TU1652966 | other | upstream | 324924 | 36492377 ~ 36529730 (+) | False | LOC110493174 |
| TU1652778 | other | upstream | 479280 | 36331235 ~ 36375374 (+) | True | G1443844 |
| TU1652322 | other | upstream | 613929 | 36238944 ~ 36240725 (+) | False | LOC118940407 |
| TU1652130 | other | upstream | 1102864 | 35746872 ~ 35751790 (+) | True | G1443251 |
| TU1653174 | other | downstream | 2495 | 36857566 ~ 36861009 (+) | True | G1444198 |
| TU1653950 | other | downstream | 547126 | 37402197 ~ 37402492 (+) | True | G1444933 |
| TU1653937 | other | downstream | 579704 | 37434775 ~ 37440412 (+) | True | chd6 |
| TU1654008 | other | downstream | 730809 | 37585880 ~ 37588727 (+) | False | rbl1 |
| TU1654009 | other | downstream | 731594 | 37586665 ~ 37588727 (+) | True | rbl1 |
