Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1666457 |
| length | 277 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G1456597 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 47246876 ~ 47247152 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1666399 | lncRNA | upstream | 47291 | 47199377 ~ 47199585 (+) | True | G1456539 |
| TU1666129 | lncRNA | upstream | 147711 | 47098965 ~ 47099165 (+) | True | G1456293 |
| TU1666127 | lncRNA | upstream | 150410 | 47096244 ~ 47096466 (+) | True | G1456291 |
| TU1666126 | lncRNA | upstream | 151531 | 47095139 ~ 47095345 (+) | True | G1456290 |
| TU1666123 | lncRNA | upstream | 156665 | 47089919 ~ 47090211 (+) | True | G1456287 |
| TU1666532 | lncRNA | downstream | 124281 | 47371433 ~ 47372541 (+) | True | otop1 |
| TU1666533 | lncRNA | downstream | 125537 | 47372689 ~ 47372813 (+) | True | G1456668 |
| TU1666536 | lncRNA | downstream | 129630 | 47376782 ~ 47378517 (+) | False | G1456670 |
| TU1666538 | lncRNA | downstream | 130539 | 47377691 ~ 47378473 (+) | False | G1456670 |
| TU1666542 | lncRNA | downstream | 130539 | 47377691 ~ 47378517 (+) | True | G1456670 |
| XM_021568624.2 | mRNA | upstream | 110006 | 47135164 ~ 47136870 (+) | True | LOC110493981 |
| XM_021568621.2 | mRNA | upstream | 112291 | 47109723 ~ 47134585 (+) | False | LOC110493980 |
| XM_021568622.2 | mRNA | upstream | 112291 | 47109723 ~ 47134585 (+) | False | LOC110493980 |
| XM_021568623.2 | mRNA | upstream | 112291 | 47109723 ~ 47134585 (+) | True | LOC110493980 |
| XM_036949987.1 | mRNA | upstream | 444674 | 46512678 ~ 46802202 (+) | True | LOC110493976 |
| XM_021568627.2 | mRNA | downstream | 39775 | 47286927 ~ 47308189 (+) | False | LOC110493983 |
| XR_002469224.2 | mRNA | downstream | 39775 | 47286927 ~ 47308189 (+) | True | LOC110493983 |
| XM_021568629.2 | mRNA | downstream | 81150 | 47328302 ~ 47341231 (+) | True | lyar |
| XM_021568632.2 | mRNA | downstream | 105080 | 47352232 ~ 47361786 (+) | False | LOC110493987 |
| XM_021568630.2 | mRNA | downstream | 105095 | 47352247 ~ 47361786 (+) | True | LOC110493987 |
| TU1666430 | other | upstream | 18080 | 47228219 ~ 47228796 (+) | True | G1456570 |
| TU1664577 | other | upstream | 1388375 | 45856249 ~ 45858501 (+) | True | G1454824 |
| TU1663824 | other | upstream | 1910353 | 45335294 ~ 45336523 (+) | True | G1454127 |
| TU1663743 | other | upstream | 1987305 | 45258475 ~ 45259571 (+) | True | G1454049 |
| TU1663604 | other | upstream | 2175951 | 45069971 ~ 45070925 (+) | True | G1453914 |
| TU1666845 | other | downstream | 558206 | 47805358 ~ 47807481 (+) | True | LOC100135862 |
| TU1666865 | other | downstream | 586428 | 47833580 ~ 47839370 (+) | True | G1456969 |
| TU1666965 | other | downstream | 783762 | 48030914 ~ 48036583 (+) | True | glrx |
| TU1667106 | other | downstream | 1141930 | 48389082 ~ 48424405 (+) | False | LOC110494013 |
| TU1668086 | other | downstream | 1446169 | 48693321 ~ 48721244 (+) | False | bsnb |
