Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1667071 |
| length | 674 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G1457158 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 48269373 ~ 48270046 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1667070 | lncRNA | upstream | 492 | 48268622 ~ 48268881 (+) | True | G1457157 |
| TU1667069 | lncRNA | upstream | 1281 | 48267876 ~ 48268092 (+) | True | G1457156 |
| TU1667068 | lncRNA | upstream | 1640 | 48267420 ~ 48267733 (+) | True | G1457155 |
| TU1667067 | lncRNA | upstream | 2446 | 48266546 ~ 48266927 (+) | True | G1457154 |
| TU1667066 | lncRNA | upstream | 3188 | 48265964 ~ 48266185 (+) | True | G1457153 |
| TU1667129 | lncRNA | downstream | 104905 | 48374951 ~ 48375172 (+) | True | G1457210 |
| TU1667133 | lncRNA | downstream | 113685 | 48383731 ~ 48383983 (+) | True | G1457214 |
| TU1667134 | lncRNA | downstream | 116956 | 48387002 ~ 48387756 (+) | True | G1457215 |
| TU1667107 | lncRNA | downstream | 119036 | 48389082 ~ 48392985 (+) | True | LOC110494013 |
| TU1667104 | lncRNA | downstream | 186774 | 48456820 ~ 48460888 (+) | False | G1457188 |
| XM_036949998.1 | mRNA | upstream | 34182 | 48194992 ~ 48235191 (+) | False | ubap2a |
| XM_036949999.1 | mRNA | upstream | 34182 | 48194992 ~ 48235191 (+) | True | ubap2a |
| XM_021568664.2 | mRNA | upstream | 90110 | 48152982 ~ 48179263 (+) | False | dcaf12 |
| XM_021568663.2 | mRNA | upstream | 90110 | 48152983 ~ 48179263 (+) | True | dcaf12 |
| XM_036949997.1 | mRNA | upstream | 94811 | 48152982 ~ 48174562 (+) | False | dcaf12 |
| XM_036950004.1 | mRNA | downstream | 37779 | 48307825 ~ 48328975 (+) | False | LOC110494009 |
| XM_021568668.2 | mRNA | downstream | 37779 | 48307825 ~ 48329446 (+) | True | LOC110494009 |
| XM_021568673.2 | mRNA | downstream | 78919 | 48348965 ~ 48354058 (+) | False | tpgs2 |
| XM_021568671.2 | mRNA | downstream | 78940 | 48348986 ~ 48354058 (+) | False | tpgs2 |
| XM_021568672.2 | mRNA | downstream | 78962 | 48349008 ~ 48354058 (+) | True | tpgs2 |
| TU1666965 | other | upstream | 232790 | 48030914 ~ 48036583 (+) | True | glrx |
| TU1666865 | other | upstream | 430003 | 47833580 ~ 47839370 (+) | True | G1456969 |
| TU1666845 | other | upstream | 461892 | 47805358 ~ 47807481 (+) | True | LOC100135862 |
| TU1666430 | other | upstream | 1040577 | 47228219 ~ 47228796 (+) | True | G1456570 |
| TU1664577 | other | upstream | 2410872 | 45856249 ~ 45858501 (+) | True | G1454824 |
| TU1667106 | other | downstream | 119036 | 48389082 ~ 48424405 (+) | False | LOC110494013 |
| TU1668086 | other | downstream | 423275 | 48693321 ~ 48721244 (+) | False | bsnb |
| TU1668190 | other | downstream | 652761 | 48922807 ~ 48928262 (+) | False | erc2 |
| TU1668185 | other | downstream | 658301 | 48928347 ~ 48938022 (+) | False | erc2 |
| TU1668186 | other | downstream | 658301 | 48928347 ~ 48938022 (+) | False | erc2 |
