Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1669222 |
| length | 530 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G1459027 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 49669211 ~ 49669740 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1669188 | lncRNA | upstream | 1428 | 49666498 ~ 49667783 (+) | True | G1458997 |
| TU1669189 | lncRNA | upstream | 4280 | 49664506 ~ 49664931 (+) | True | G1458998 |
| TU1669175 | lncRNA | upstream | 80329 | 49587952 ~ 49588882 (+) | True | G1458992 |
| TU1669107 | lncRNA | upstream | 180912 | 49478942 ~ 49488299 (+) | True | cacna1da |
| TU1669088 | lncRNA | upstream | 193252 | 49475545 ~ 49475959 (+) | True | G1458935 |
| TU1669225 | lncRNA | downstream | 2381 | 49672121 ~ 49672345 (+) | True | G1459030 |
| TU1669253 | lncRNA | downstream | 38170 | 49707910 ~ 49773572 (+) | True | G1459052 |
| TU1669279 | lncRNA | downstream | 86768 | 49756508 ~ 49763510 (+) | True | G1459076 |
| TU1669298 | lncRNA | downstream | 113845 | 49783585 ~ 49815087 (+) | True | G1459092 |
| TU1669314 | lncRNA | downstream | 163272 | 49833012 ~ 50010633 (+) | False | G1459107 |
| XM_021570293.2 | mRNA | upstream | 11244 | 49604663 ~ 49657967 (+) | True | LOC110494954 |
| XM_036948173.1 | mRNA | upstream | 74711 | 49478916 ~ 49594500 (+) | False | cacna1da |
| XM_036948186.1 | mRNA | downstream | 511305 | 50181045 ~ 50192699 (+) | False | LOC110494957 |
| XM_021570299.2 | mRNA | downstream | 511310 | 50181050 ~ 50192699 (+) | False | LOC110494957 |
| XM_021570327.2 | mRNA | downstream | 527363 | 50197103 ~ 50207320 (+) | True | LOC110494976 |
| XM_021570338.2 | mRNA | downstream | 552901 | 50222641 ~ 50229675 (+) | True | LOC110494984 |
| XM_036947899.1 | mRNA | downstream | 563907 | 50233647 ~ 50239667 (+) | False | rhoa |
| TU1668956 | other | upstream | 229882 | 49439006 ~ 49439329 (+) | True | G1458807 |
| TU1668189 | other | upstream | 628855 | 48933340 ~ 49040356 (+) | True | erc2 |
| TU1668185 | other | upstream | 731189 | 48928347 ~ 48938022 (+) | False | erc2 |
| TU1669722 | other | downstream | 511425 | 50181165 ~ 50183696 (+) | True | LOC110494957 |
| TU1669855 | other | downstream | 761067 | 50430807 ~ 50435706 (+) | False | atxn7l2a |
| TU1670065 | other | downstream | 1106789 | 50776529 ~ 50777072 (+) | True | G1459769 |
| TU1670568 | other | downstream | 1225200 | 50894940 ~ 50897444 (+) | True | LOC110494047 |
| TU1670644 | other | downstream | 1410392 | 51080132 ~ 51090889 (+) | False | G1460249 |
