RNA id: TU1681089



Basic Information


Item Value
RNA id TU1681089
length 251
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G1469761
representative True

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59117285 ~ 59117535 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AGGGATTTCTTCCATTgacggagaggcggaccaaagcgcagcgtggttattttgactcatgttttaataaatcacttcacattaacaaactaacaaaaacacgaaacgtgaaaacccaaaacagccctatctggtgcaaaacacagagacaggaacaatcacccacaaacacagtgacacccaggctacctaagtatgattctcaatcagagacaactaatgacacctgcctctgattgagaaccatacta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1681077 lncRNA upstream 4526 59112540 ~ 59112759 (+) True G1469749
TU1680733 lncRNA upstream 30849 59086047 ~ 59086436 (+) True G1469415
TU1680728 lncRNA upstream 32846 59084225 ~ 59084439 (+) True G1469411
TU1680726 lncRNA upstream 37311 59079569 ~ 59079974 (+) True G1469409
TU1680725 lncRNA upstream 46052 59070514 ~ 59071233 (+) True G1469408
TU1681186 lncRNA downstream 129606 59247141 ~ 59247611 (+) True G1469849
TU1681187 lncRNA downstream 130730 59248265 ~ 59248549 (+) True G1469850
TU1681188 lncRNA downstream 131670 59249205 ~ 59249504 (+) True G1469851
TU1681195 lncRNA downstream 140807 59258342 ~ 59258556 (+) False LOC110494244
TU1681198 lncRNA downstream 145616 59263151 ~ 59263383 (+) False LOC110494244
XM_036950322.1 mRNA upstream 106206 58832894 ~ 59011079 (+) False LOC110494239
XM_021567415.2 mRNA downstream 93142 59210677 ~ 59245106 (+) False LOC100136832
XM_021567416.2 mRNA downstream 93142 59210677 ~ 59245106 (+) False LOC100136832
XM_021567417.2 mRNA downstream 93142 59210677 ~ 59245106 (+) False LOC100136832
XM_021567419.2 mRNA downstream 93142 59210677 ~ 59245106 (+) False LOC100136832
XM_021567420.2 mRNA downstream 93142 59210677 ~ 59245106 (+) False LOC100136832
TU1680364 other upstream 609400 58507297 ~ 58507885 (+) True G1469076
TU1678198 other upstream 1502985 57589865 ~ 57614300 (+) True G1467219
TU1678194 other upstream 1569107 57498382 ~ 57548178 (+) False LOC110494206
TU1678132 other upstream 1633696 57478797 ~ 57483589 (+) True G1467159
TU1677994 other upstream 1966942 57149303 ~ 57150343 (+) True G1467031
TU1682011 other downstream 984357 60101892 ~ 60104007 (+) False G1470607
TU1683229 other downstream 1854943 60972478 ~ 60999063 (+) True G1471723
TU1684022 other downstream 2438784 61556319 ~ 61557038 (+) True LOC110494283
TU1684810 other downstream 3580968 62698503 ~ 62698815 (+) True G1473171
TU1684816 other downstream 3592804 62710339 ~ 62711136 (+) True G1473177

Expression Profile