Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1682533 |
| length | 310 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G1471078 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60168940 ~ 60169249 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1682530 | lncRNA | downstream | 2287 | 60166413 ~ 60166653 (-) | True | G1471075 |
| TU1682529 | lncRNA | downstream | 4825 | 60163916 ~ 60164115 (-) | True | G1471074 |
| TU1682522 | lncRNA | downstream | 13571 | 60154843 ~ 60155369 (-) | True | G1471067 |
| TU1682518 | lncRNA | downstream | 18553 | 60150188 ~ 60150387 (-) | True | G1471063 |
| TU1682515 | lncRNA | downstream | 21617 | 60147109 ~ 60147323 (-) | True | G1471060 |
| TU1682534 | lncRNA | upstream | 1753 | 60171002 ~ 60171263 (-) | True | G1471079 |
| TU1682548 | lncRNA | upstream | 17740 | 60186989 ~ 60187190 (-) | True | G1471093 |
| TU1682550 | lncRNA | upstream | 20443 | 60189692 ~ 60189976 (-) | True | G1471095 |
| TU1682575 | lncRNA | upstream | 58494 | 60227743 ~ 60228037 (-) | True | G1471119 |
| TU1682576 | lncRNA | upstream | 59625 | 60228874 ~ 60229194 (-) | True | G1471120 |
| XM_036948424.1 | mRNA | downstream | 58691 | 60104033 ~ 60110249 (-) | False | LOC110494257 |
| XM_021569187.2 | mRNA | downstream | 140289 | 60008004 ~ 60028651 (-) | True | LOC110494254 |
| XM_021569186.2 | mRNA | downstream | 140290 | 60008004 ~ 60028650 (-) | False | LOC110494254 |
| XM_021569181.2 | mRNA | downstream | 169200 | 59991520 ~ 59999740 (-) | False | LOC110494253 |
| XM_036948425.1 | mRNA | upstream | 22476 | 60191725 ~ 60193447 (-) | True | LOC118940153 |
| XM_021569191.2 | mRNA | upstream | 28371 | 60197620 ~ 60223564 (-) | True | LOC110494258 |
| XM_036950351.1 | mRNA | upstream | 66626 | 60235875 ~ 60244681 (-) | False | thumpd3 |
| XM_021569194.2 | mRNA | upstream | 66626 | 60235875 ~ 60244818 (-) | True | thumpd3 |
| XR_005037150.1 | mRNA | upstream | 87599 | 60256848 ~ 60257008 (-) | True | LOC118940555 |
| TU1682489 | other | downstream | 61753 | 60106669 ~ 60107187 (-) | True | LOC110494257 |
| TU1682385 | other | downstream | 172614 | 59990975 ~ 59996326 (-) | False | LOC110494253 |
| TU1682386 | other | downstream | 172614 | 59990975 ~ 59996326 (-) | True | LOC110494253 |
| TU1682225 | other | downstream | 492246 | 59674541 ~ 59676694 (-) | True | G1470802 |
| TU1678906 | other | downstream | 2936233 | 57229507 ~ 57232707 (-) | True | hig1a |
| TU1682687 | other | upstream | 206497 | 60375746 ~ 60376592 (-) | False | G1471219 |
| TU1683060 | other | upstream | 468931 | 60638180 ~ 60639335 (-) | False | G1471564 |
| TU1685283 | other | upstream | 2077130 | 62246379 ~ 62250638 (-) | False | ccdc174 |
| TU1685284 | other | upstream | 2077130 | 62246379 ~ 62250638 (-) | False | ccdc174 |
| TU1685286 | other | upstream | 2077130 | 62246379 ~ 62250638 (-) | False | ccdc174 |
