Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1683238 |
| length | 548 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 1 |
| gene id | G1471732 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 61022612 ~ 61023159 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1683225 | lncRNA | upstream | 3425 | 61014736 ~ 61019187 (+) | True | LOC110494274 |
| TU1683303 | lncRNA | upstream | 16784 | 61005602 ~ 61005828 (+) | True | G1471795 |
| TU1683302 | lncRNA | upstream | 17272 | 61005067 ~ 61005340 (+) | True | G1471794 |
| TU1683213 | lncRNA | upstream | 135883 | 60886363 ~ 60886729 (+) | True | G1471709 |
| TU1683191 | lncRNA | upstream | 174868 | 60847292 ~ 60847744 (+) | True | G1471687 |
| TU1683304 | lncRNA | downstream | 15149 | 61038308 ~ 61038515 (+) | True | G1471796 |
| TU1683237 | lncRNA | downstream | 17319 | 61040478 ~ 61041083 (+) | False | LOC110494276 |
| TU1683307 | lncRNA | downstream | 20147 | 61043306 ~ 61043525 (+) | True | LOC110494276 |
| TU1683226 | lncRNA | downstream | 110019 | 61133178 ~ 61135571 (+) | True | G1471720 |
| TU1683361 | lncRNA | downstream | 114060 | 61137219 ~ 61137589 (+) | True | G1471853 |
| XM_021569217.2 | mRNA | upstream | 3871 | 61014725 ~ 61018741 (+) | False | LOC110494274 |
| XR_002469241.2 | mRNA | upstream | 50893 | 60970324 ~ 60971719 (+) | True | LOC110494272 |
| XM_021569203.2 | mRNA | upstream | 422998 | 60575678 ~ 60599614 (+) | True | LOC110494264 |
| XM_021569200.2 | mRNA | upstream | 514017 | 60433926 ~ 60508595 (+) | False | rad18 |
| XM_021569218.2 | mRNA | downstream | 1549 | 61024708 ~ 61037602 (+) | False | LOC110494275 |
| XM_036950360.1 | mRNA | downstream | 1549 | 61024708 ~ 61037602 (+) | False | LOC110494275 |
| XM_036950361.1 | mRNA | downstream | 1549 | 61024708 ~ 61037602 (+) | False | LOC110494275 |
| XM_036950362.1 | mRNA | downstream | 5271 | 61028430 ~ 61037602 (+) | True | LOC110494275 |
| XM_021569221.2 | mRNA | downstream | 16119 | 61039278 ~ 61043722 (+) | False | LOC110494276 |
| TU1683229 | other | upstream | 23549 | 60972478 ~ 60999063 (+) | True | G1471723 |
| TU1682011 | other | upstream | 918605 | 60101892 ~ 60104007 (+) | False | G1470607 |
| TU1680364 | other | upstream | 2514727 | 58507297 ~ 58507885 (+) | True | G1469076 |
| TU1678198 | other | upstream | 3408312 | 57589865 ~ 57614300 (+) | True | G1467219 |
| TU1678194 | other | upstream | 3474434 | 57498382 ~ 57548178 (+) | False | LOC110494206 |
| TU1684022 | other | downstream | 533160 | 61556319 ~ 61557038 (+) | True | LOC110494283 |
| TU1684810 | other | downstream | 1675344 | 62698503 ~ 62698815 (+) | True | G1473171 |
| TU1684816 | other | downstream | 1687180 | 62710339 ~ 62711136 (+) | True | G1473177 |
| TU1685904 | other | downstream | 2193789 | 63216948 ~ 63217594 (+) | True | G1474159 |
| TU1686655 | other | downstream | 2635285 | 63658444 ~ 63663254 (+) | True | srsf3b |
