Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1686857 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1474995 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 63966360 ~ 63966573 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1686838 | lncRNA | upstream | 15275 | 63944119 ~ 63951085 (+) | True | G1474977 |
| TU1686816 | lncRNA | upstream | 47291 | 63911845 ~ 63919069 (+) | True | LOC110494366 |
| TU1686758 | lncRNA | upstream | 82833 | 63878260 ~ 63883527 (+) | True | LOC110494364 |
| TU1686710 | lncRNA | upstream | 183431 | 63780589 ~ 63782929 (+) | True | G1474858 |
| TU1686705 | lncRNA | upstream | 229880 | 63735944 ~ 63736480 (+) | True | G1474855 |
| TU1686867 | lncRNA | downstream | 8773 | 63975346 ~ 63975546 (+) | True | G1475005 |
| TU1686870 | lncRNA | downstream | 11095 | 63977668 ~ 63977920 (+) | True | G1475008 |
| TU1686874 | lncRNA | downstream | 14046 | 63980619 ~ 63980854 (+) | True | G1475012 |
| TU1686933 | lncRNA | downstream | 123184 | 64089757 ~ 64091921 (+) | True | G1475066 |
| TU1686939 | lncRNA | downstream | 129132 | 64095705 ~ 64096426 (+) | True | G1475072 |
| XM_036950425.1 | mRNA | upstream | 46804 | 63909040 ~ 63919556 (+) | False | LOC110494366 |
| XM_021569356.2 | mRNA | upstream | 46804 | 63909042 ~ 63919556 (+) | False | LOC110494366 |
| XM_021569354.2 | mRNA | upstream | 62485 | 63892998 ~ 63903875 (+) | False | nbl1 |
| XM_021569353.2 | mRNA | upstream | 62485 | 63894081 ~ 63903875 (+) | True | nbl1 |
| XM_021569352.2 | mRNA | upstream | 82833 | 63878239 ~ 63883527 (+) | False | LOC110494364 |
| XM_036950426.1 | mRNA | downstream | 76582 | 64043155 ~ 64052786 (+) | True | LOC110494367 |
| XM_021569358.2 | mRNA | downstream | 86655 | 64053228 ~ 64056392 (+) | True | LOC110494368 |
| LOC110493238 | mRNA | downstream | 90424 | 64056997 ~ 64058645 (+) | True | LOC110493238 |
| XM_021569359.2 | mRNA | downstream | 97197 | 64063770 ~ 64066586 (+) | True | fndc10 |
| XM_021569360.2 | mRNA | downstream | 100198 | 64066771 ~ 64071414 (+) | True | ssu72 |
| TU1686672 | other | upstream | 278270 | 63684090 ~ 63688090 (+) | True | tmcc2 |
| TU1686655 | other | upstream | 303106 | 63658444 ~ 63663254 (+) | True | srsf3b |
| TU1685904 | other | upstream | 748766 | 63216948 ~ 63217594 (+) | True | G1474159 |
| TU1684816 | other | upstream | 1255224 | 62710339 ~ 62711136 (+) | True | G1473177 |
| TU1684810 | other | upstream | 1267545 | 62698503 ~ 62698815 (+) | True | G1473171 |
| TU1687795 | other | downstream | 596801 | 64563374 ~ 64565146 (+) | True | G1475820 |
| TU1687820 | other | downstream | 641681 | 64608254 ~ 64622169 (+) | True | LOC110494386 |
| TU1688055 | other | downstream | 788748 | 64755321 ~ 64774706 (+) | False | LOC110494389 |
| TU1688070 | other | downstream | 788748 | 64755321 ~ 64780475 (+) | False | LOC110494389 |
| TU1688642 | other | downstream | 1336844 | 65303417 ~ 65304128 (+) | True | G1476510 |
