Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1688000 |
| length | 202 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G1475997 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 64713430 ~ 64713631 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1687819 | lncRNA | upstream | 84037 | 64618731 ~ 64629393 (+) | False | G1475842 |
| TU1687818 | lncRNA | upstream | 84037 | 64625772 ~ 64629393 (+) | True | G1475842 |
| TU1687812 | lncRNA | upstream | 115511 | 64597698 ~ 64597919 (+) | True | G1475836 |
| TU1687808 | lncRNA | upstream | 119975 | 64593226 ~ 64593455 (+) | True | G1475832 |
| TU1687805 | lncRNA | upstream | 122580 | 64589086 ~ 64590850 (+) | True | si:ch211-117k10.3 |
| TU1688014 | lncRNA | downstream | 8832 | 64722463 ~ 64722906 (+) | True | G1476011 |
| TU1688017 | lncRNA | downstream | 11136 | 64724767 ~ 64725095 (+) | True | G1476014 |
| TU1688023 | lncRNA | downstream | 16263 | 64729894 ~ 64730133 (+) | True | G1476020 |
| TU1688056 | lncRNA | downstream | 61188 | 64774819 ~ 64780475 (+) | False | LOC110494389 |
| TU1688060 | lncRNA | downstream | 61188 | 64774819 ~ 64780475 (+) | False | LOC110494389 |
| XM_021569391.2 | mRNA | upstream | 88319 | 64608194 ~ 64625111 (+) | False | LOC110494386 |
| XR_002469269.2 | mRNA | downstream | 41763 | 64755394 ~ 64774729 (+) | False | LOC110494389 |
| XM_021569398.2 | mRNA | downstream | 89279 | 64802910 ~ 64823080 (+) | True | LOC110494390 |
| XM_036950443.1 | mRNA | downstream | 133337 | 64846968 ~ 64881151 (+) | True | LOC110494391 |
| XM_021569402.2 | mRNA | downstream | 183232 | 64896863 ~ 64914194 (+) | False | LOC110494394 |
| XR_005037049.1 | mRNA | downstream | 183232 | 64896863 ~ 64914194 (+) | False | LOC110494394 |
| TU1687820 | other | upstream | 91261 | 64608254 ~ 64622169 (+) | True | LOC110494386 |
| TU1687795 | other | upstream | 148284 | 64563374 ~ 64565146 (+) | True | G1475820 |
| TU1686672 | other | upstream | 1025340 | 63684090 ~ 63688090 (+) | True | tmcc2 |
| TU1686655 | other | upstream | 1050176 | 63658444 ~ 63663254 (+) | True | srsf3b |
| TU1685904 | other | upstream | 1495836 | 63216948 ~ 63217594 (+) | True | G1474159 |
| TU1688055 | other | downstream | 41690 | 64755321 ~ 64774706 (+) | False | LOC110494389 |
| TU1688070 | other | downstream | 41690 | 64755321 ~ 64780475 (+) | False | LOC110494389 |
| TU1688642 | other | downstream | 589786 | 65303417 ~ 65304128 (+) | True | G1476510 |
| TU1688655 | other | downstream | 612246 | 65325877 ~ 65327163 (+) | True | G1476520 |
| TU1688718 | other | downstream | 704460 | 65418091 ~ 65448513 (+) | False | G1476569 |
