Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1688596 |
| length | 238 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G1476476 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 65248636 ~ 65273516 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1688536 | lncRNA | upstream | 99583 | 65148211 ~ 65149053 (+) | True | G1476427 |
| TU1688506 | lncRNA | upstream | 132812 | 65114675 ~ 65115824 (+) | True | G1476398 |
| TU1688497 | lncRNA | upstream | 137957 | 65107516 ~ 65110679 (+) | False | G1476393 |
| TU1688499 | lncRNA | upstream | 137957 | 65108544 ~ 65110679 (+) | True | G1476393 |
| TU1688498 | lncRNA | upstream | 138323 | 65108544 ~ 65110313 (+) | False | G1476393 |
| TU1688670 | lncRNA | downstream | 80734 | 65354250 ~ 65354508 (+) | True | G1476531 |
| TU1688689 | lncRNA | downstream | 119748 | 65393264 ~ 65400606 (+) | True | G1476550 |
| TU1688690 | lncRNA | downstream | 122195 | 65395711 ~ 65402635 (+) | True | G1476551 |
| TU1688708 | lncRNA | downstream | 167499 | 65441015 ~ 65500519 (+) | False | G1476568 |
| TU1688714 | lncRNA | downstream | 167499 | 65441015 ~ 65476017 (+) | False | G1476568 |
| XM_036950447.1 | mRNA | upstream | 233846 | 64996583 ~ 65014790 (+) | False | LOC110494396 |
| XM_036950448.1 | mRNA | upstream | 233846 | 64996666 ~ 65014790 (+) | True | LOC110494396 |
| XM_036950449.1 | mRNA | upstream | 237131 | 64996582 ~ 65011505 (+) | False | LOC110494396 |
| XR_005037051.1 | mRNA | upstream | 334442 | 64896863 ~ 64914194 (+) | False | LOC110494394 |
| LOC118940493 | mRNA | downstream | 179836 | 65453352 ~ 65454830 (+) | True | LOC118940493 |
| XR_005037053.1 | mRNA | downstream | 250183 | 65523699 ~ 65552657 (+) | False | LOC118940487 |
| XM_021569418.2 | mRNA | downstream | 298851 | 65572367 ~ 65578944 (+) | True | LOC110494410 |
| XM_036950455.1 | mRNA | downstream | 306740 | 65580256 ~ 65649976 (+) | False | LOC110516128 |
| XM_036950457.1 | mRNA | downstream | 306740 | 65580256 ~ 65649976 (+) | False | LOC110516128 |
| TU1688070 | other | upstream | 468161 | 64755321 ~ 64780475 (+) | False | LOC110494389 |
| TU1688055 | other | upstream | 473930 | 64755321 ~ 64774706 (+) | False | LOC110494389 |
| TU1687820 | other | upstream | 626467 | 64608254 ~ 64622169 (+) | True | LOC110494386 |
| TU1687795 | other | upstream | 683490 | 64563374 ~ 64565146 (+) | True | G1475820 |
| TU1686672 | other | upstream | 1560546 | 63684090 ~ 63688090 (+) | True | tmcc2 |
| TU1688642 | other | downstream | 29901 | 65303417 ~ 65304128 (+) | True | G1476510 |
| TU1688655 | other | downstream | 52361 | 65325877 ~ 65327163 (+) | True | G1476520 |
| TU1688718 | other | downstream | 144575 | 65418091 ~ 65448513 (+) | False | G1476569 |
| TU1688719 | other | downstream | 144575 | 65418091 ~ 65466767 (+) | True | G1476569 |
| TU1689118 | other | downstream | 508263 | 65781779 ~ 65783335 (+) | True | G1476898 |
