RNA id: TU1694745


Basic Information

Item Value
RNA id TU1694745
length 279
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G1482021
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 70415406 ~ 70415684 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

accccactcttccacaaaggcacctgcaagttcccggacatttctggggggaatggccctagccctcaccctccgatccaacaggatccagacatgctcaatggaattgagatccgggctcttcgctggctatggcagaacactgacattcctgtcttgcaggaaatcacgtacagaacgagcagtatggctcaccagcattgtcatgctggagcgtcatgtcaggatgagcctgcaggaagggtaccacatgaggaaggaggatgtcttccctgtaac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1694534 lncRNA upstream 401 70413250 ~ 70415005 (+) False LOC110494487
TU1694535 lncRNA upstream 401 70413289 ~ 70415005 (+) False LOC110494487
TU1694537 lncRNA upstream 498 70413250 ~ 70414908 (+) False LOC110494487
TU1694536 lncRNA upstream 498 70413289 ~ 70414908 (+) True LOC110494487
TU1694712 lncRNA upstream 46645 70337090 ~ 70368761 (+) True G1481989
TU1694757 lncRNA downstream 23632 70439316 ~ 70440807 (+) True G1482033
TU1694762 lncRNA downstream 34442 70450126 ~ 70450343 (+) True G1482038
TU1694767 lncRNA downstream 43391 70459075 ~ 70459309 (+) True G1482043
TU1694770 lncRNA downstream 47052 70462736 ~ 70525606 (+) True G1482046
TU1694783 lncRNA downstream 68248 70483932 ~ 70484312 (+) True G1482059
XM_036950543.1 mRNA upstream 414 70100382 ~ 70414992 (+) False LOC110494487
XM_036950544.1 mRNA upstream 414 70100382 ~ 70414992 (+) False LOC110494487
XM_036950545.1 mRNA upstream 414 70100382 ~ 70414992 (+) False LOC110494487
XM_036950546.1 mRNA upstream 10274 70100371 ~ 70405132 (+) False LOC110494487
XM_021569590.2 mRNA upstream 985747 69371687 ~ 69429659 (+) False LOC110494482
XM_036950547.1 mRNA downstream 5572 70421256 ~ 70429407 (+) False c17h3orf14
XM_021569598.2 mRNA downstream 7996 70423680 ~ 70429407 (+) False c17h3orf14
XM_021569600.2 mRNA downstream 8138 70423822 ~ 70429407 (+) False c17h3orf14
XM_021569599.2 mRNA downstream 10090 70425774 ~ 70429407 (+) True c17h3orf14
XM_021569602.2 mRNA downstream 222520 70638204 ~ 70656059 (+) False nampt2
TU1692848 other upstream 1416223 68994632 ~ 68999183 (+) True G1480254
TU1692851 other upstream 1431928 68934326 ~ 68983478 (+) False G1480254
TU1692079 other upstream 2289626 68122538 ~ 68125780 (+) True G1479621
TU1690884 other upstream 2751757 67661987 ~ 67663649 (+) True G1478504
TU1690094 other upstream 3547526 66867525 ~ 66867880 (+) True LOC110494429
TU1695519 other downstream 235259 70650943 ~ 70656057 (+) True nampt2
TU1695603 other downstream 423936 70839620 ~ 70841230 (+) True LOC110494494
TU1696175 other downstream 762829 71178513 ~ 71180429 (+) True G1483346
TU1696516 other downstream 966260 71381944 ~ 71382272 (+) True G1483638
TU1697747 other downstream 1889039 72304723 ~ 72305412 (+) True G1484782

Expression Profile