RNA id: TU1694762


Basic Information

Item Value
RNA id TU1694762
length 218
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G1482038
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 70450126 ~ 70450343 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gaatatcatgtagtaacctaaatcTATCGATGTTAcactgaactgggtgaatggaatatgaatgacagttatccaatatgctgtaatagaaataaggccatgctcatgaaaaaaaaccTGACTCCCTCATCATGAACGTCACCGACCGCCATTGTACTGTATACAATGTTACAATAACACAAGCTTTTGGCGGGTTTTCCCCTTAGAATGATCAGCAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1694757 lncRNA upstream 9319 70439316 ~ 70440807 (+) True G1482033
TU1694745 lncRNA upstream 34442 70415406 ~ 70415684 (+) True G1482021
TU1694534 lncRNA upstream 35121 70413250 ~ 70415005 (+) False LOC110494487
TU1694767 lncRNA downstream 8732 70459075 ~ 70459309 (+) True G1482043
TU1694770 lncRNA downstream 12393 70462736 ~ 70525606 (+) True G1482046
TU1694783 lncRNA downstream 33589 70483932 ~ 70484312 (+) True G1482059
TU1694835 lncRNA downstream 99626 70549969 ~ 70550515 (+) True G1482106
TU1695500 lncRNA downstream 169329 70619672 ~ 70619879 (+) True G1482725
XM_036950547.1 mRNA upstream 20719 70421256 ~ 70429407 (+) False c17h3orf14
XM_021569598.2 mRNA upstream 20719 70423680 ~ 70429407 (+) False c17h3orf14
XM_021569600.2 mRNA upstream 20719 70423822 ~ 70429407 (+) False c17h3orf14
XM_021569599.2 mRNA upstream 20719 70425774 ~ 70429407 (+) True c17h3orf14
XM_036950545.1 mRNA upstream 35134 70100382 ~ 70414992 (+) False LOC110494487
XM_021569602.2 mRNA downstream 187861 70638204 ~ 70656059 (+) False nampt2
XM_036950558.1 mRNA downstream 187862 70638205 ~ 70656059 (+) False nampt2
XM_021569605.2 mRNA downstream 221308 70671651 ~ 70712982 (+) True LOC110494491
NM_001124751.1 mRNA downstream 277239 70727582 ~ 70738226 (+) True mx2
XM_021569608.2 mRNA downstream 297494 70747837 ~ 70759905 (+) True LOC110494492
TU1692848 other upstream 1450943 68994632 ~ 68999183 (+) True G1480254
TU1692851 other upstream 1466648 68934326 ~ 68983478 (+) False G1480254
TU1692079 other upstream 2324346 68122538 ~ 68125780 (+) True G1479621
TU1690884 other upstream 2786477 67661987 ~ 67663649 (+) True G1478504
TU1690094 other upstream 3582246 66867525 ~ 66867880 (+) True LOC110494429
TU1695519 other downstream 200600 70650943 ~ 70656057 (+) True nampt2
TU1695603 other downstream 389277 70839620 ~ 70841230 (+) True LOC110494494
TU1696175 other downstream 728170 71178513 ~ 71180429 (+) True G1483346
TU1696516 other downstream 931601 71381944 ~ 71382272 (+) True G1483638
TU1697747 other downstream 1854380 72304723 ~ 72305412 (+) True G1484782

Expression Profile