RNA id: TU1695753


Basic Information

Item Value
RNA id TU1695753
length 204
lncRNA type intronic
GC content 0.48
exon number 1
gene id G1482959
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 71075366 ~ 71075569 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtcgtgcctgCTTCAATACTCTCTTGGTGTGTTTgcaccatgatagtttgttggtgatatggacaccaagaatcttgaagctctcaacctgctccactacagccccgtcgatgtaaATGGAGAGTGCTcgaccctccttttcctgtagtccacaatcatctcatttatctttctcacgttgagggagaggttgttgtcctggca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1695598 lncRNA upstream 131343 70851928 ~ 70944023 (+) False slc2a9l1
TU1695666 lncRNA upstream 134632 70940431 ~ 70940734 (+) True G1482873
TU1695601 lncRNA upstream 220210 70852809 ~ 70855156 (+) True slc2a9l1
TU1695512 lncRNA upstream 448166 70626841 ~ 70627200 (+) True G1482737
TU1695503 lncRNA upstream 452146 70622888 ~ 70623220 (+) True G1482728
TU1695755 lncRNA downstream 1838 71077407 ~ 71077707 (+) True G1482961
TU1695756 lncRNA downstream 3720 71079289 ~ 71079520 (+) True G1482962
TU1696601 lncRNA downstream 372338 71447907 ~ 71448238 (+) True G1483721
TU1696618 lncRNA downstream 402899 71478468 ~ 71478743 (+) True G1483735
TU1696606 lncRNA downstream 427846 71503415 ~ 71518363 (+) True slc25a26
XM_036950562.1 mRNA upstream 213239 70855148 ~ 70862127 (+) False slc2a9l1
XM_036950561.1 mRNA upstream 213239 70855159 ~ 70862127 (+) False slc2a9l1
XM_021569612.2 mRNA upstream 213239 70855410 ~ 70862127 (+) False slc2a9l1
XM_036950559.1 mRNA upstream 227976 70809971 ~ 70847390 (+) False LOC110494494
NM_001171901.1 mRNA upstream 273748 70793615 ~ 70801618 (+) True mx
LOC110494500 mRNA downstream 96444 71172013 ~ 71173244 (+) True LOC110494500
XM_036950570.1 mRNA downstream 374091 71449660 ~ 71518366 (+) False slc25a26
XM_036950571.1 mRNA downstream 374091 71449660 ~ 71518366 (+) False slc25a26
XM_021569629.2 mRNA downstream 595086 71670655 ~ 71678016 (+) False kbtbd8
XM_021567510.2 mRNA downstream 602820 71678389 ~ 71688655 (+) False LOC110493246
TU1695603 other upstream 234136 70839620 ~ 70841230 (+) True LOC110494494
TU1695519 other upstream 419309 70650943 ~ 70656057 (+) True nampt2
TU1692848 other upstream 2076183 68994632 ~ 68999183 (+) True G1480254
TU1692851 other upstream 2091888 68934326 ~ 68983478 (+) False G1480254
TU1692079 other upstream 2949586 68122538 ~ 68125780 (+) True G1479621
TU1696175 other downstream 102944 71178513 ~ 71180429 (+) True G1483346
TU1696516 other downstream 306375 71381944 ~ 71382272 (+) True G1483638
TU1697747 other downstream 1229154 72304723 ~ 72305412 (+) True G1484782
TU1697884 other downstream 1378994 72454563 ~ 72454924 (+) True G1484897
TU1698249 other downstream 1969168 73044737 ~ 73045588 (+) True LOC110494525

Expression Profile