RNA id: TU1699203



Basic Information


Item Value
RNA id TU1699203
length 206
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G1486085
representative True

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 73460715 ~ 73460920 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tcttcttttggtgtttttcagagtcagtagaaaagcctctttagtgtcctaagttttcataactgtgaccttaattgcctaccgtttgtaagctgttagtgtcttaatgaccgttccataAGGGTTtattaattgaacaagcatgggaaacagtgttaaaaccctttacaatgaatatctgtgaagttatttgaatttgtatgaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1699013 lncRNA upstream 18808 73441055 ~ 73441907 (+) True G1485907
TU1699009 lncRNA upstream 22442 73438001 ~ 73438273 (+) True G1485903
TU1699004 lncRNA upstream 29511 73430953 ~ 73431204 (+) True G1485898
TU1699003 lncRNA upstream 29778 73430370 ~ 73430937 (+) True G1485897
TU1698944 lncRNA upstream 39430 73420414 ~ 73421285 (+) True G1485840
TU1699223 lncRNA downstream 12816 73473736 ~ 73474399 (+) True G1486105
TU1699224 lncRNA downstream 13734 73474654 ~ 73474915 (+) True G1486106
TU1699340 lncRNA downstream 202522 73663442 ~ 73663848 (+) True G1486221
TU1699345 lncRNA downstream 208151 73669071 ~ 73671902 (+) True G1486225
TU1699464 lncRNA downstream 371276 73832196 ~ 73858579 (+) True G1486338
XM_021569675.2 mRNA upstream 3083 73444750 ~ 73457632 (+) False taf4a
XM_021569677.2 mRNA upstream 3083 73444750 ~ 73457632 (+) False taf4a
XM_021569678.2 mRNA upstream 3083 73444750 ~ 73457632 (+) False taf4a
XM_021569679.2 mRNA upstream 3083 73444750 ~ 73457632 (+) True taf4a
XM_021569673.2 mRNA upstream 44028 73395740 ~ 73416687 (+) False LOC110494537
XM_021569681.2 mRNA downstream 595255 74056175 ~ 74066815 (+) False LOC110494542
XM_036950602.1 mRNA downstream 595255 74056175 ~ 74066815 (+) False LOC110494542
XM_036950604.1 mRNA downstream 595255 74056175 ~ 74066815 (+) False LOC110494542
XM_036950605.1 mRNA downstream 595255 74056175 ~ 74066815 (+) True LOC110494542
XM_036950607.1 mRNA downstream 609141 74070061 ~ 74084580 (+) False LOC110494543
TU1698921 other upstream 178696 73281260 ~ 73282019 (+) True G1485819
TU1698303 other upstream 335359 73122826 ~ 73125356 (+) True G1485260
TU1698249 other upstream 415127 73044737 ~ 73045588 (+) True LOC110494525
TU1697884 other upstream 1005791 72454563 ~ 72454924 (+) True G1484897
TU1697747 other upstream 1155303 72304723 ~ 72305412 (+) True G1484782
TU1699979 other downstream 517970 73978890 ~ 73979435 (+) True G1486811
TU1700469 other downstream 927616 74388536 ~ 74409189 (+) False LOC110493252
TU1703557 other downstream 3222679 76683599 ~ 76684020 (+) True G1490016
TU1705554 other downstream 4547370 78008290 ~ 78008799 (+) True G1491886
TU1705568 other downstream 4557448 78018368 ~ 78019816 (+) True G1491899

Expression Profile