RNA id: TU1703742


Basic Information

Item Value
RNA id TU1703742
length 202
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G1490189
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 76686105 ~ 76686306 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

aaggcaaagggtggctactttgaagaatctcaaatataaaatatatttggatttgtttaacacttttttggttactacatgattccatatgtgttatttcatagttttgatgccttgactactattctacagtgtagaaaataataaagaataaataaaaaccctggaatgaatagGTGCGTCCCAAACGTTTCACCGGTAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1703724 lncRNA downstream 27530 76658224 ~ 76658575 (-) True G1490173
TU1703723 lncRNA downstream 28536 76657277 ~ 76657569 (-) True G1490172
TU1703721 lncRNA downstream 29683 76656343 ~ 76656422 (-) True G1490170
TU1703722 lncRNA downstream 31120 76654710 ~ 76654985 (-) True G1490171
TU1703718 lncRNA downstream 37035 76648824 ~ 76649070 (-) True G1490167
TU1703747 lncRNA upstream 6602 76692908 ~ 76693282 (-) True G1490194
TU1703699 lncRNA upstream 12466 76698772 ~ 76699891 (-) True LOC110494603
TU1703880 lncRNA upstream 194388 76880694 ~ 76880999 (-) True G1490319
TU1703887 lncRNA upstream 203250 76889556 ~ 76889869 (-) True G1490326
TU1703899 lncRNA upstream 215195 76901501 ~ 76901934 (-) True G1490338
XM_036950694.1 mRNA downstream 114078 76545230 ~ 76572027 (-) True LOC110494599
XM_036950695.1 mRNA downstream 114081 76545230 ~ 76572024 (-) False LOC110494599
XM_036950696.1 mRNA downstream 114081 76545230 ~ 76572024 (-) False LOC110494599
XM_036950697.1 mRNA downstream 114081 76545230 ~ 76572024 (-) False LOC110494599
XM_036950693.1 mRNA downstream 132636 76545230 ~ 76553469 (-) False LOC110494599
XM_021569818.2 mRNA upstream 13155 76699461 ~ 76734254 (-) False LOC110494603
XM_021569819.2 mRNA upstream 13155 76699461 ~ 76776314 (-) False LOC110494603
XM_021569817.2 mRNA upstream 13155 76699461 ~ 76835863 (-) False LOC110494603
XM_021569820.2 mRNA upstream 321933 77008239 ~ 77087424 (-) False LOC110494605
XM_021569821.2 mRNA upstream 321933 77008239 ~ 77087427 (-) False LOC110494605
TU1702105 other downstream 1160509 75525182 ~ 75525596 (-) True G1488708
TU1701641 other downstream 1421882 75263720 ~ 75264223 (-) True G1488266
TU1701218 other downstream 1786358 74899391 ~ 74899747 (-) True G1487872
TU1700880 other downstream 1978496 74707345 ~ 74707609 (-) True G1487599
TU1700704 other downstream 2262220 74422647 ~ 74423885 (-) True G1487454
TU1703698 other upstream 10490 76696796 ~ 76698096 (-) True G1490147
TU1704739 other upstream 795635 77481941 ~ 77482389 (-) True G1491128
TU1706388 other upstream 1401297 78087603 ~ 78088852 (-) True LOC110493260
TU1706362 other upstream 1528693 78214999 ~ 78219043 (-) True LOC110494620
TU1706560 other upstream 1786712 78473018 ~ 78475506 (-) True G1492729

Expression Profile