RNA id: TU1703747


Basic Information

Item Value
RNA id TU1703747
length 375
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G1490194
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 76692908 ~ 76693282 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gctacggtgggtttgtgcccataggcgacctgtgcctgtcctgcaggtgtgatgtaccaatcctatgcaggtgttgttacacgtggtctgccactgcgaggacgatcagctgtccgtcctgtctccctgtaacgcTTTccaggcgtctcacagtatggacattgcaatttattgccctggccacatctgcagtcctcatgcccccTCGCAGCATGCCTagggcacattcacgcagattagcagggaccctgggcatctttcttttggtgttttccagagtcagtagaaaggcctctttggtgtcctaagttttcataactgtgaccttaattgcctaccgtttgtaagctgttagtgtcttaacgaccattccac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1703742 lncRNA downstream 6602 76686105 ~ 76686306 (-) True G1490189
TU1703724 lncRNA downstream 34333 76658224 ~ 76658575 (-) True G1490173
TU1703723 lncRNA downstream 35339 76657277 ~ 76657569 (-) True G1490172
TU1703721 lncRNA downstream 36486 76656343 ~ 76656422 (-) True G1490170
TU1703722 lncRNA downstream 37923 76654710 ~ 76654985 (-) True G1490171
TU1703699 lncRNA upstream 5490 76698772 ~ 76699891 (-) True LOC110494603
TU1703880 lncRNA upstream 187412 76880694 ~ 76880999 (-) True G1490319
TU1703887 lncRNA upstream 196274 76889556 ~ 76889869 (-) True G1490326
TU1703899 lncRNA upstream 208219 76901501 ~ 76901934 (-) True G1490338
TU1703915 lncRNA upstream 221753 76915035 ~ 76915262 (-) True G1490354
XM_036950694.1 mRNA downstream 120881 76545230 ~ 76572027 (-) True LOC110494599
XM_036950695.1 mRNA downstream 120884 76545230 ~ 76572024 (-) False LOC110494599
XM_036950696.1 mRNA downstream 120884 76545230 ~ 76572024 (-) False LOC110494599
XM_036950697.1 mRNA downstream 120884 76545230 ~ 76572024 (-) False LOC110494599
XM_036950693.1 mRNA downstream 139439 76545230 ~ 76553469 (-) False LOC110494599
XM_021569818.2 mRNA upstream 6179 76699461 ~ 76734254 (-) False LOC110494603
XM_021569819.2 mRNA upstream 6179 76699461 ~ 76776314 (-) False LOC110494603
XM_021569817.2 mRNA upstream 6179 76699461 ~ 76835863 (-) False LOC110494603
XM_021569820.2 mRNA upstream 314957 77008239 ~ 77087424 (-) False LOC110494605
XM_021569821.2 mRNA upstream 314957 77008239 ~ 77087427 (-) False LOC110494605
TU1702105 other downstream 1167312 75525182 ~ 75525596 (-) True G1488708
TU1701641 other downstream 1428685 75263720 ~ 75264223 (-) True G1488266
TU1701218 other downstream 1793161 74899391 ~ 74899747 (-) True G1487872
TU1700880 other downstream 1985299 74707345 ~ 74707609 (-) True G1487599
TU1700704 other downstream 2269023 74422647 ~ 74423885 (-) True G1487454
TU1703698 other upstream 3514 76696796 ~ 76698096 (-) True G1490147
TU1704739 other upstream 788659 77481941 ~ 77482389 (-) True G1491128
TU1706388 other upstream 1394321 78087603 ~ 78088852 (-) True LOC110493260
TU1706362 other upstream 1521717 78214999 ~ 78219043 (-) True LOC110494620
TU1706560 other upstream 1779736 78473018 ~ 78475506 (-) True G1492729

Expression Profile