RNA id: TU1703963


Basic Information

Item Value
RNA id TU1703963
length 201
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G1490401
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 76952972 ~ 76953172 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cagaagaagctcgtcaaatgtaaggcatgatttatatttttatttctgcgttttgtgtcgtgcctgcagagttgaaatatgttttctctcttttgtttatggaggtgctatcctcagataatagcatcgtttgctttcgccgaaaagcctttttgaaatctgacatgttggctggattcacaacacatGTAGCTTTAATTt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1703944 lncRNA downstream 15901 76936866 ~ 76937071 (-) True G1490382
TU1703933 lncRNA downstream 23736 76928783 ~ 76929236 (-) True G1490372
TU1703915 lncRNA downstream 37710 76915035 ~ 76915262 (-) True G1490354
TU1703899 lncRNA downstream 51038 76901501 ~ 76901934 (-) True G1490338
TU1703887 lncRNA downstream 63103 76889556 ~ 76889869 (-) True G1490326
TU1704142 lncRNA upstream 50632 77003804 ~ 77005581 (-) True G1490572
TU1704140 lncRNA upstream 55299 77008471 ~ 77013421 (-) True LOC110494605
TU1704202 lncRNA upstream 153122 77106294 ~ 77106761 (-) True G1490630
TU1704494 lncRNA upstream 361096 77314268 ~ 77314546 (-) True G1490901
TU1704740 lncRNA upstream 529728 77482900 ~ 77483182 (-) True G1491129
XM_021569817.2 mRNA downstream 117109 76699461 ~ 76835863 (-) False LOC110494603
XM_021569819.2 mRNA downstream 176658 76699461 ~ 76776314 (-) False LOC110494603
XM_021569818.2 mRNA downstream 218718 76699461 ~ 76734254 (-) False LOC110494603
XM_036950694.1 mRNA downstream 380945 76545230 ~ 76572027 (-) True LOC110494599
XM_036950697.1 mRNA downstream 380948 76545230 ~ 76572024 (-) False LOC110494599
XM_021569820.2 mRNA upstream 55067 77008239 ~ 77087424 (-) False LOC110494605
XM_021569821.2 mRNA upstream 55067 77008239 ~ 77087427 (-) False LOC110494605
XM_036950708.1 mRNA upstream 818229 77771401 ~ 77956452 (-) False LOC110494609
XM_036950709.1 mRNA upstream 818229 77771401 ~ 77956452 (-) False LOC110494609
XM_036950704.1 mRNA upstream 818229 77771401 ~ 77956456 (-) False LOC110494609
TU1703698 other downstream 254876 76696796 ~ 76698096 (-) True G1490147
TU1702105 other downstream 1427376 75525182 ~ 75525596 (-) True G1488708
TU1701641 other downstream 1688749 75263720 ~ 75264223 (-) True G1488266
TU1701218 other downstream 2053225 74899391 ~ 74899747 (-) True G1487872
TU1700880 other downstream 2245363 74707345 ~ 74707609 (-) True G1487599
TU1704739 other upstream 528769 77481941 ~ 77482389 (-) True G1491128
TU1706388 other upstream 1134431 78087603 ~ 78088852 (-) True LOC110493260
TU1706362 other upstream 1261827 78214999 ~ 78219043 (-) True LOC110494620
TU1706560 other upstream 1519846 78473018 ~ 78475506 (-) True G1492729
TU1706741 other upstream 1817568 78770740 ~ 78771954 (-) True G1492897

Expression Profile