Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1705557 |
| length | 253 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 4 |
| gene id | G1491889 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 78009105 ~ 78010123 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1705553 | lncRNA | upstream | 852 | 78008029 ~ 78008253 (+) | True | G1491885 |
| TU1705488 | lncRNA | upstream | 51299 | 77957603 ~ 77957806 (+) | True | G1491831 |
| TU1705033 | lncRNA | upstream | 140190 | 77794792 ~ 77868915 (+) | True | G1491417 |
| TU1704811 | lncRNA | upstream | 476774 | 77532123 ~ 77532331 (+) | True | G1491200 |
| TU1704800 | lncRNA | upstream | 481006 | 77527847 ~ 77528099 (+) | True | G1491189 |
| TU1705560 | lncRNA | downstream | 463 | 78010586 ~ 78010787 (+) | True | G1491892 |
| TU1705614 | lncRNA | downstream | 75944 | 78086067 ~ 78086589 (+) | True | G1491925 |
| TU1705617 | lncRNA | downstream | 80056 | 78090179 ~ 78090496 (+) | True | G1491928 |
| TU1705628 | lncRNA | downstream | 112206 | 78122329 ~ 78122539 (+) | True | G1491939 |
| TU1705630 | lncRNA | downstream | 114103 | 78124226 ~ 78125219 (+) | True | G1491941 |
| XM_021569831.2 | mRNA | upstream | 237883 | 77552527 ~ 77771222 (+) | False | LOC110494608 |
| XM_021569833.2 | mRNA | upstream | 237883 | 77552527 ~ 77771222 (+) | False | LOC110494608 |
| XM_021569832.2 | mRNA | upstream | 237883 | 77552801 ~ 77771222 (+) | True | LOC110494608 |
| XM_021569830.2 | mRNA | upstream | 560404 | 77335285 ~ 77448701 (+) | False | LOC110494607 |
| LOC110493259 | mRNA | downstream | 4220 | 78014343 ~ 78015218 (+) | True | LOC110493259 |
| XR_005037083.1 | mRNA | downstream | 18468 | 78028591 ~ 78029532 (+) | True | LOC110494613 |
| NM_001124198.1 | mRNA | downstream | 21364 | 78031487 ~ 78036695 (+) | True | lbp/bpi-2 |
| XM_036947917.1 | mRNA | downstream | 40846 | 78050969 ~ 78053292 (+) | False | tcbp2 |
| XM_036947916.1 | mRNA | downstream | 40869 | 78050992 ~ 78053292 (+) | False | tcbp2 |
| TU1705554 | other | upstream | 306 | 78008290 ~ 78008799 (+) | True | G1491886 |
| TU1703557 | other | upstream | 1325085 | 76683599 ~ 76684020 (+) | True | G1490016 |
| TU1700469 | other | upstream | 3599916 | 74388536 ~ 74409189 (+) | False | LOC110493252 |
| TU1699979 | other | upstream | 4029670 | 73978890 ~ 73979435 (+) | True | G1486811 |
| TU1698921 | other | upstream | 4727086 | 73281260 ~ 73282019 (+) | True | G1485819 |
| TU1705568 | other | downstream | 8245 | 78018368 ~ 78019816 (+) | True | G1491899 |
| TU1705667 | other | downstream | 178889 | 78189012 ~ 78190290 (+) | False | G1491963 |
| TU1705669 | other | downstream | 178889 | 78189012 ~ 78190290 (+) | False | G1491963 |
| TU1705741 | other | downstream | 242506 | 78252629 ~ 78253308 (+) | True | G1492003 |
| TU1706084 | other | downstream | 760624 | 78770747 ~ 78773759 (+) | False | G1492310 |
