RNA id: TU1709658


Basic Information

Item Value
RNA id TU1709658
length 212
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G1495540
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81317496 ~ 81317707 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATGTTGAATATGAATAACGGAGTGCTGGGTTACTAATGGACTGACTTTGGATGAGACAGAAATTGTATACATCTACTTCACTGTAACATTTCGAAACACAGATTGTATGAAACAAGTTGAAAAAAATGACACTATTTCAATTGAAAAGTTTGTGGTCGTTCTCAAATCCTTAAAAAACGTAGGTGCTGGGCTAATAAAGAATACATGTGAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1709657 lncRNA downstream 5 81316935 ~ 81317491 (-) True G1495539
TU1709655 lncRNA downstream 728 81315670 ~ 81316768 (-) True G1495537
TU1709654 lncRNA downstream 7082 81309999 ~ 81310414 (-) True G1495536
TU1709652 lncRNA downstream 9996 81307262 ~ 81307500 (-) True G1495534
TU1709651 lncRNA downstream 13651 81303403 ~ 81303845 (-) True G1495533
TU1709677 lncRNA upstream 15772 81333479 ~ 81338469 (-) True G1495556
TU1709661 lncRNA upstream 60424 81378131 ~ 81380670 (-) True G1495542
TU1709714 lncRNA upstream 105543 81423250 ~ 81423498 (-) True G1495591
TU1709715 lncRNA upstream 108747 81426454 ~ 81426676 (-) True G1495592
TU1709734 lncRNA upstream 132820 81450527 ~ 81451217 (-) True G1495609
XM_021569982.2 mRNA downstream 78867 81116459 ~ 81238629 (-) False LOC110494690
XM_021569984.2 mRNA downstream 78867 81116459 ~ 81238629 (-) False LOC110494690
XM_021569980.2 mRNA downstream 213554 81090497 ~ 81103942 (-) False LOC110494689
XM_021569981.2 mRNA downstream 213554 81090497 ~ 81103942 (-) False LOC110494689
XM_036950747.1 mRNA downstream 221900 81090497 ~ 81095596 (-) False LOC110494689
XM_036950748.1 mRNA upstream 24490 81342197 ~ 81374548 (-) True LOC110494693
XM_036950749.1 mRNA upstream 78363 81396070 ~ 81420329 (-) False LOC110494695
XM_036950750.1 mRNA upstream 78363 81396070 ~ 81420330 (-) False LOC110494695
XM_036950751.1 mRNA upstream 78363 81396070 ~ 81420330 (-) True LOC110494695
XM_036948436.1 mRNA upstream 163575 81481282 ~ 81488954 (-) True LOC118940159
TU1709656 other downstream 3181 81311747 ~ 81314315 (-) True G1495538
TU1709315 other downstream 202258 81110445 ~ 81115238 (-) True G1495222
TU1709210 other downstream 213582 81093519 ~ 81103914 (-) True LOC110494689
TU1709196 other downstream 250814 81065971 ~ 81066682 (-) True G1495113
TU1709066 other downstream 422059 80895088 ~ 80895437 (-) True G1495003
TU1709673 other upstream 8978 81326685 ~ 81327113 (-) True G1495552
TU1710622 other upstream 854762 82172469 ~ 82174852 (-) False G1496390
TU1710627 other upstream 854762 82172469 ~ 82174852 (-) True G1496390
TU1710947 other upstream 917421 82235128 ~ 82240264 (-) False G1496689
TU1710950 other upstream 917421 82235128 ~ 82245987 (-) False G1496689

Expression Profile