RNA id: TU1710787


Basic Information

Item Value
RNA id TU1710787
length 216
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G1496535
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 82426195 ~ 82426410 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GGTTAAGAGGCTAAGGATCAAAGAGCCAATATCTTGAAATCAATGTCCTAGCATTAAATTACTGAGTTACCCATAGCTCAGAGATGCACAGTTAGAGACCGAGCATATATGCTATGTATATTATGAACAACATTTCACCAAATAATAATTCAAGGAATATTACTCAGAAATGTGAAGACTATGGTTCATGTCCATTTAAAAGTAATCATATTTATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1710781 lncRNA upstream 9692 82416250 ~ 82416503 (+) True G1496529
TU1710697 lncRNA upstream 82980 82342601 ~ 82343215 (+) True G1496453
TU1710699 lncRNA upstream 149308 82276434 ~ 82276887 (+) True G1496455
TU1710718 lncRNA upstream 166502 82259452 ~ 82259693 (+) True G1496471
TU1710713 lncRNA upstream 177794 82248202 ~ 82248401 (+) True G1496466
TU1710789 lncRNA downstream 1261 82427671 ~ 82427927 (+) True G1496537
TU1710801 lncRNA downstream 21740 82448150 ~ 82448503 (+) True G1496548
TU1710805 lncRNA downstream 31857 82458267 ~ 82459046 (+) True G1496552
TU1710806 lncRNA downstream 33165 82459575 ~ 82459915 (+) True G1496553
TU1710816 lncRNA downstream 43688 82470098 ~ 82470306 (+) True G1496563
XM_021570015.2 mRNA upstream 22683 82391443 ~ 82403512 (+) True LOC110494716
XM_021570010.2 mRNA upstream 72788 82277351 ~ 82353407 (+) False LOC110494715
XM_036950757.1 mRNA downstream 35277 82461687 ~ 82518805 (+) True LOC118940498
XM_036950760.1 mRNA downstream 107111 82533521 ~ 82636002 (+) False LOC110493275
XM_036950761.1 mRNA downstream 107111 82533521 ~ 82636002 (+) False LOC110493275
XM_036950762.1 mRNA downstream 107111 82533521 ~ 82636002 (+) False LOC110493275
XM_036950765.1 mRNA downstream 107111 82533521 ~ 82636002 (+) False LOC110493275
TU1710572 other upstream 256445 82163206 ~ 82169750 (+) False G1496351
TU1710167 other upstream 593094 81828732 ~ 81833101 (+) False LOC110494698
TU1709526 other upstream 824038 81432211 ~ 81602157 (+) True LOC110494696
TU1709462 other upstream 1088032 81337017 ~ 81338163 (+) True G1495362
TU1709446 other upstream 1132269 81293440 ~ 81293926 (+) True G1495346
TU1712329 other downstream 1187855 83614265 ~ 83634495 (+) True G1497918
TU1712638 other downstream 1453522 83879932 ~ 83881188 (+) True LOC110494749
TU1713169 other downstream 1699427 84125837 ~ 84174177 (+) True G1498583
TU1713567 other downstream 2069519 84495929 ~ 84497398 (+) True G1498913
TU1713556 other downstream 2089707 84516117 ~ 84517180 (+) False G1498912

Expression Profile