RNA id: TU1710835


Basic Information

Item Value
RNA id TU1710835
length 212
lncRNA type intronic
GC content 0.44
exon number 1
gene id G1496581
representative True

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 82500962 ~ 82501173 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gaccatcttaaaacggCTTAGAATTTTACCCAATGCCACTGACATCCAGCAATTTGAAGAGGTAAGGGTAGAGGTGGACTTCTAACGCTTACAGTAACATCAGTCATGTTTTTGTATGACCCCATGAGATGTATTACGCCTTTTGTTTTCATTGGTTGTGGCTCCCATTAGGCAACCCGATTGGGGAGCTGAGTGAGGGAGTGAAATATAGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1710833 lncRNA upstream 2503 82498177 ~ 82498459 (+) True G1496579
TU1710831 lncRNA upstream 4369 82496272 ~ 82496593 (+) True G1496577
TU1710830 lncRNA upstream 6424 82494327 ~ 82494538 (+) True G1496576
TU1710823 lncRNA upstream 21901 82478714 ~ 82479061 (+) True G1496570
TU1710822 lncRNA upstream 22252 82478388 ~ 82478710 (+) True G1496569
TU1710837 lncRNA downstream 3712 82504885 ~ 82505142 (+) True G1496583
TU1710839 lncRNA downstream 5969 82507142 ~ 82507348 (+) True G1496585
TU1710840 lncRNA downstream 7196 82508369 ~ 82509537 (+) True G1496586
TU1710845 lncRNA downstream 18674 82519847 ~ 82520105 (+) True G1496591
TU1710846 lncRNA downstream 19709 82520882 ~ 82521172 (+) True G1496592
XM_021570015.2 mRNA upstream 97450 82391443 ~ 82403512 (+) True LOC110494716
XM_021570010.2 mRNA upstream 147555 82277351 ~ 82353407 (+) False LOC110494715
XM_036950760.1 mRNA downstream 32348 82533521 ~ 82636002 (+) False LOC110493275
XM_036950761.1 mRNA downstream 32348 82533521 ~ 82636002 (+) False LOC110493275
XM_036950762.1 mRNA downstream 32348 82533521 ~ 82636002 (+) False LOC110493275
XM_036950765.1 mRNA downstream 32348 82533521 ~ 82636002 (+) False LOC110493275
XM_036950767.1 mRNA downstream 32348 82533521 ~ 82636002 (+) False LOC110493275
TU1710572 other upstream 331212 82163206 ~ 82169750 (+) False G1496351
TU1710167 other upstream 667861 81828732 ~ 81833101 (+) False LOC110494698
TU1709526 other upstream 898805 81432211 ~ 81602157 (+) True LOC110494696
TU1709462 other upstream 1162799 81337017 ~ 81338163 (+) True G1495362
TU1709446 other upstream 1207036 81293440 ~ 81293926 (+) True G1495346
TU1712329 other downstream 1113092 83614265 ~ 83634495 (+) True G1497918
TU1712638 other downstream 1378759 83879932 ~ 83881188 (+) True LOC110494749
TU1713169 other downstream 1624664 84125837 ~ 84174177 (+) True G1498583
TU1713567 other downstream 1994756 84495929 ~ 84497398 (+) True G1498913
TU1713556 other downstream 2014944 84516117 ~ 84517180 (+) False G1498912

Expression Profile