Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1717465 |
| length | 413 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G1502111 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 88247911 ~ 88248323 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1717464 | lncRNA | downstream | 301 | 88247393 ~ 88247610 (-) | True | G1502110 |
| TU1717457 | lncRNA | downstream | 15849 | 88229631 ~ 88232062 (-) | True | G1502103 |
| TU1717443 | lncRNA | downstream | 27961 | 88219031 ~ 88219950 (-) | True | G1502095 |
| TU1717367 | lncRNA | downstream | 64189 | 88181701 ~ 88183722 (-) | True | LOC110494815 |
| TU1717405 | lncRNA | downstream | 104503 | 88141454 ~ 88143408 (-) | True | G1502063 |
| TU1717468 | lncRNA | upstream | 5519 | 88253842 ~ 88254100 (-) | True | G1502114 |
| TU1717489 | lncRNA | upstream | 35666 | 88283989 ~ 88296129 (-) | False | G1502135 |
| TU1717490 | lncRNA | upstream | 35666 | 88283989 ~ 88292237 (-) | False | G1502135 |
| TU1717493 | lncRNA | upstream | 35666 | 88283989 ~ 88289375 (-) | False | G1502135 |
| TU1717494 | lncRNA | upstream | 35666 | 88283989 ~ 88289375 (-) | False | G1502135 |
| XM_021570146.2 | mRNA | downstream | 2406 | 88233684 ~ 88245505 (-) | True | zgc:171566 |
| XM_021570147.2 | mRNA | downstream | 64154 | 88181683 ~ 88183757 (-) | False | LOC110494815 |
| NM_001165127.1 | mRNA | downstream | 72566 | 88162116 ~ 88175345 (-) | False | dnsl3 |
| XM_036950920.1 | mRNA | downstream | 88907 | 88144616 ~ 88159004 (-) | True | LOC110493297 |
| XM_036950913.1 | mRNA | downstream | 740323 | 87494104 ~ 87507588 (-) | True | LOC110495200 |
| XM_036948442.1 | mRNA | upstream | 188923 | 88437246 ~ 88600371 (-) | True | LOC110494809 |
| LOC110493292 | mRNA | upstream | 624597 | 88872920 ~ 88877452 (-) | False | LOC110493292 |
| XM_036950931.1 | mRNA | upstream | 653535 | 88901858 ~ 88907612 (-) | False | LOC118940510 |
| XM_036950929.1 | mRNA | upstream | 653535 | 88901858 ~ 88907675 (-) | True | LOC118940510 |
| XM_036950943.1 | mRNA | upstream | 1329249 | 89577572 ~ 89658569 (-) | False | pcbp4 |
| TU1717411 | other | downstream | 72565 | 88162278 ~ 88175346 (-) | False | dnsl3 |
| TU1717412 | other | downstream | 83369 | 88162278 ~ 88164542 (-) | True | dnsl3 |
| TU1717031 | other | downstream | 852076 | 87394780 ~ 87395835 (-) | True | G1501745 |
| TU1716920 | other | downstream | 1088667 | 87134058 ~ 87159244 (-) | False | G1501650 |
| TU1716092 | other | downstream | 1441380 | 86798065 ~ 86806531 (-) | False | LOC110493290 |
| TU1717937 | other | upstream | 109829 | 88358152 ~ 88425505 (-) | False | G1502489 |
| TU1717938 | other | upstream | 170676 | 88418999 ~ 88425505 (-) | False | G1502489 |
| TU1718044 | other | upstream | 302043 | 88550366 ~ 88552831 (-) | True | G1502566 |
| TU1718207 | other | upstream | 624452 | 88872775 ~ 88874526 (-) | True | LOC110493292 |
| TU1719190 | other | upstream | 1327638 | 89575961 ~ 89578851 (-) | True | pcbp4 |
