Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1718013 |
| length | 471 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 3 |
| gene id | G1502537 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 88482851 ~ 88483685 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1718008 | lncRNA | downstream | 9751 | 88472857 ~ 88473100 (-) | True | G1502533 |
| TU1718003 | lncRNA | downstream | 31081 | 88451510 ~ 88451770 (-) | True | G1502528 |
| TU1717948 | lncRNA | downstream | 57346 | 88423952 ~ 88425505 (-) | False | G1502489 |
| TU1717953 | lncRNA | downstream | 57346 | 88424466 ~ 88425505 (-) | True | G1502489 |
| TU1717955 | lncRNA | downstream | 59367 | 88418999 ~ 88423484 (-) | False | G1502489 |
| TU1718016 | lncRNA | upstream | 1251 | 88484936 ~ 88535464 (-) | True | G1502539 |
| TU1718039 | lncRNA | upstream | 59203 | 88542888 ~ 88543273 (-) | True | G1502561 |
| TU1718054 | lncRNA | upstream | 86707 | 88570392 ~ 88570597 (-) | True | G1502576 |
| TU1718072 | lncRNA | upstream | 120490 | 88604175 ~ 88605272 (-) | True | G1502587 |
| TU1718074 | lncRNA | upstream | 127027 | 88610712 ~ 88611461 (-) | True | G1502588 |
| XM_021570146.2 | mRNA | downstream | 237346 | 88233684 ~ 88245505 (-) | True | zgc:171566 |
| XM_021570147.2 | mRNA | downstream | 299094 | 88181683 ~ 88183757 (-) | False | LOC110494815 |
| NM_001165127.1 | mRNA | downstream | 307506 | 88162116 ~ 88175345 (-) | False | dnsl3 |
| XM_036950920.1 | mRNA | downstream | 323847 | 88144616 ~ 88159004 (-) | True | LOC110493297 |
| XM_036950913.1 | mRNA | downstream | 975263 | 87494104 ~ 87507588 (-) | True | LOC110495200 |
| LOC110493292 | mRNA | upstream | 389235 | 88872920 ~ 88877452 (-) | False | LOC110493292 |
| XM_036950931.1 | mRNA | upstream | 418173 | 88901858 ~ 88907612 (-) | False | LOC118940510 |
| XM_036950929.1 | mRNA | upstream | 418173 | 88901858 ~ 88907675 (-) | True | LOC118940510 |
| XM_036950943.1 | mRNA | upstream | 1093887 | 89577572 ~ 89658569 (-) | False | pcbp4 |
| XM_036950944.1 | mRNA | upstream | 1093887 | 89577572 ~ 89725807 (-) | False | pcbp4 |
| TU1717937 | other | downstream | 57346 | 88358152 ~ 88425505 (-) | False | G1502489 |
| TU1717938 | other | downstream | 57346 | 88418999 ~ 88425505 (-) | False | G1502489 |
| TU1717411 | other | downstream | 307505 | 88162278 ~ 88175346 (-) | False | dnsl3 |
| TU1717412 | other | downstream | 318309 | 88162278 ~ 88164542 (-) | True | dnsl3 |
| TU1717031 | other | downstream | 1087016 | 87394780 ~ 87395835 (-) | True | G1501745 |
| TU1718044 | other | upstream | 66681 | 88550366 ~ 88552831 (-) | True | G1502566 |
| TU1718207 | other | upstream | 389090 | 88872775 ~ 88874526 (-) | True | LOC110493292 |
| TU1719190 | other | upstream | 1092276 | 89575961 ~ 89578851 (-) | True | pcbp4 |
| TU1719292 | other | upstream | 1202730 | 89686415 ~ 89686877 (-) | True | G1503624 |
| TU1721876 | other | upstream | 3631608 | 92115293 ~ 92170717 (-) | True | G1505789 |
