Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1718072 |
| length | 308 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 4 |
| gene id | G1502587 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 88604175 ~ 88605272 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1718054 | lncRNA | downstream | 33578 | 88570392 ~ 88570597 (-) | True | G1502576 |
| TU1718039 | lncRNA | downstream | 60902 | 88542888 ~ 88543273 (-) | True | G1502561 |
| TU1718016 | lncRNA | downstream | 68711 | 88484936 ~ 88535464 (-) | True | G1502539 |
| TU1718013 | lncRNA | downstream | 120490 | 88482851 ~ 88483685 (-) | True | G1502537 |
| TU1718008 | lncRNA | downstream | 131075 | 88472857 ~ 88473100 (-) | True | G1502533 |
| TU1718074 | lncRNA | upstream | 5440 | 88610712 ~ 88611461 (-) | True | G1502588 |
| TU1718086 | lncRNA | upstream | 27604 | 88632876 ~ 88633098 (-) | True | G1502599 |
| TU1718090 | lncRNA | upstream | 31792 | 88637064 ~ 88638415 (-) | True | G1502603 |
| TU1718093 | lncRNA | upstream | 37819 | 88643091 ~ 88643591 (-) | True | G1502606 |
| TU1718095 | lncRNA | upstream | 40072 | 88645344 ~ 88646660 (-) | True | G1502608 |
| XM_036948442.1 | mRNA | downstream | 3804 | 88437246 ~ 88600371 (-) | True | LOC110494809 |
| XM_021570146.2 | mRNA | downstream | 358670 | 88233684 ~ 88245505 (-) | True | zgc:171566 |
| XM_021570147.2 | mRNA | downstream | 420418 | 88181683 ~ 88183757 (-) | False | LOC110494815 |
| NM_001165127.1 | mRNA | downstream | 428830 | 88162116 ~ 88175345 (-) | False | dnsl3 |
| XM_036950920.1 | mRNA | downstream | 445171 | 88144616 ~ 88159004 (-) | True | LOC110493297 |
| LOC110493292 | mRNA | upstream | 267648 | 88872920 ~ 88877452 (-) | False | LOC110493292 |
| XM_036950931.1 | mRNA | upstream | 296586 | 88901858 ~ 88907612 (-) | False | LOC118940510 |
| XM_036950929.1 | mRNA | upstream | 296586 | 88901858 ~ 88907675 (-) | True | LOC118940510 |
| XM_036950943.1 | mRNA | upstream | 972300 | 89577572 ~ 89658569 (-) | False | pcbp4 |
| XM_036950944.1 | mRNA | upstream | 972300 | 89577572 ~ 89725807 (-) | False | pcbp4 |
| TU1718044 | other | downstream | 51344 | 88550366 ~ 88552831 (-) | True | G1502566 |
| TU1717937 | other | downstream | 178670 | 88358152 ~ 88425505 (-) | False | G1502489 |
| TU1717938 | other | downstream | 178670 | 88418999 ~ 88425505 (-) | False | G1502489 |
| TU1717411 | other | downstream | 428829 | 88162278 ~ 88175346 (-) | False | dnsl3 |
| TU1718207 | other | upstream | 267503 | 88872775 ~ 88874526 (-) | True | LOC110493292 |
| TU1719190 | other | upstream | 970689 | 89575961 ~ 89578851 (-) | True | pcbp4 |
| TU1719292 | other | upstream | 1081143 | 89686415 ~ 89686877 (-) | True | G1503624 |
| TU1721876 | other | upstream | 3510021 | 92115293 ~ 92170717 (-) | True | G1505789 |
| TU1722385 | other | upstream | 3732781 | 92338053 ~ 92339443 (-) | True | G1506160 |
