RNA id: TCONS_00047703


Basic Information

Item Value
RNA id TCONS_00047703
length 4770
RNA type mRNA
GC content 0.47
exon number 29
gene id XLOC_024039
representative False

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 19238175 ~ 19347077 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTCTACAGGGTTTGTTTTCTTCTCCAGCGCCTGTCAACAGTTTGCTGAAGGTAAGTTCACGCGCAGCTCCAGTTTCACACTGACAGCAGACAAGGAAGTCTTAACGCTGTCCTCCAGCAACAGTTCCTCTTTCAAACAAgtAAGACGTTGATCAGGATTAGCATGTTCCTGGTTCTAGAAGGATGACACAAAATCTTTAAGGATCCAACAAGCACCATTTTCAAATTCTCTGTGCTGTTGAAGTTACTTCTTGGCCTTCATCCCACTGGATTTCACACCTCATCTGTCTAATGTTCTCACCACTGAGCTTCAGCGCGAGATGCTGTTCTGGGAGTTGGGCTGTTTGACAGAGACTCGACAGAAATGTCGAAGTCAAGCGGGATGTCCAACAGTGAACTTCCTCGGTTCCTCATTGGAAGTGAAGTAGGTGAAAGCAGAAAATTGGACAACAGAGACATGAGGAACATCTCAGGGCCTTacggggaggaggaggaggaggaggaggaggatgaagatcaGGTAAAGAATTTGTGAGGAAGTTTTTCATGGATGAGCATCGTTGCAGATTTGTGGTCAATttgttgtctttttctttttttttctgttagtcAGAGCGTCAGATCGTGGTGGGGATCTGTTCGATGATGAAGAAATCCACATCTAAACCAATGACAGAGATTTTGGAGAGGCTCTGTAAGTTTGAGTACATCACCGTGGTCATTTTTCCAGAGGAGGTTATACTTGGTGAACCGGTGGAGAAGTGGCCGCTGTGTGACTGCCTCATTTCCTTCCATTCCAAAGGTTTTCCCCTTGACAAAGCAATGAGTTATGCCAAACTAAGAAATCCCCTTCTTATCAACGACCTCAACATGCAGTATTTCATTCAAGATAGGAGGGAAGTGTATAGGATTTTAAAGGAAGAGGGCATTGACCTTCCACGCTATGCAGTGTTGAACCGGGACCCTGACCGACCAGAAGAGTGTAACCTTGTAGAAAGCGAGGACCATGTGGAAGTGAATGGAGAAGTGTTTCATAAACCCTTTGTGGAAAAGCCTGTTTCTGCTGAGGACCACAATGTCTACATCTATTACCCAACCTCAGCCGGCGGGGGCAGCCAGCGCCTCTTTAGAAAGATTGGCAGCCGGAGCAGTGTTTATTCTCCTGAAAGTACTGTCCGTAAGACTGGGTCTTACATCTACGAGGAGTTCATGCCCACAGATGGCACTGATGTCAAGGTTTACACGGTAGGACCTGATTATGCTCACGCTGAGGCCCGTAAGTCTCCTGCTCTGGATGGGAAAGTGGAAAGAGACAGTGAGGGGAAGGAGATCCGCTATCCTGTGATGCTCACTGCAATGGAGAAGCTTGTTGCCAGAAAAGTGTGTCTTGCGTTTAAgCAAACAGTCTGTGGTTTTGACCTCCTCCGAGCAAATGGCCACTCTTTCGTCTGTGATGTTAATGGCTTCAGCTTTGTTAAGAACTCCATGAAGTACTATGATGATTGTGCCAAAGTACTGGGGAACATGGTGATGCGAGAGCTGGCTCCTCAGTTCCACATCCCCTGGTCAATCCCCATGGAGGCGGAGGACATCCCAATCGTCCCGACTACCTCAGGAACCATGATGGAGCTGCGTTGTGTCATTGCTGTAATTCGACATGGTGACCGAACACCCAAACAGAAGATGAAGATGGAGGTCAGAAATGCCCTGTTTTTCGAATTGTTTGAAAAATATGGTGGATATAAGAGCGGAAAACTCAAACTGAAGAAACCAAAACAACTCCAGGAAGTGCTGGATATCGCTCGTCAGCTGTTGGCAGAGCTGGTCCTGCATAATGACTGTGAGATTGAGGAGAAGAAATCCAAACTGGAGCAACTCAAGACGGTTCTGGAGATGTATGGACATTTCTCAGGGATCAACAGGAAGGTACAGTTGACATATCTGCCAAATGGCCAGCCAAAAGCATCCAGCGAGGAAGAAGACACTCTGAAGGAGGGTCCGTCTCTGCTGCTGGTGTTGAAGTGGGGGGGTGAACTGACTCCAGCAGGCAGAGTTCAGGCAGAGGAGCTGGGCAGAGCTTTCCGCTGCATGTACCCTGGAGGACAAGGTGATTATGCAGGTTTCCCTGGTTGTGGTCTTCTGCGTTTACACAGCACTTACCGCCATGACCTCAAAATTTATGCCTCGGATGAGGGTCGTGTGCAGATGACGGCGGCGGCGTTCGCAAAGGGTCTGTTAGCTCTAGAAGGAGAGTTGACCCCTATCCTGGTTCAGATGGTGAAGAGTGCCAACATGAACGGGCTTCTGGACAGTGACAGCGACTCACTCACCGACTGTCAGCAGAGAGTCAAAGCTCGGCTACATGAGATCATGCAGAAGAGCAAAGACTTCAATGACGATGACTACAGCAAGTTGGCTCCGACAGGCAGCCCGTCTTTGGTGAACTCAATGGGGATCATCATCAATCCCGTCAGGACCTGTGATCAAGTTCACACCCTCATTAAAAGCCTCACTCAGCAGATCTGCAGAAGACTGGAAGACCCCAAATCTGCTGACCTGCAGTTGTACCACAGTGAGTCTCTGGAGCTCATGCTGCAGCGCTGGTCTAAACTGGAGCGGGATTTCCGAATGAAGAACGGCCGCTACGACATCAGCAAGATCCCAGACATCTACGATTGCGTGAAATACGACACGCAGCACAACAGCTCTCTGGCTCTGGAGGACACCCTGGAGCTCTTCCATCTGTCCAAAGCGCTGGCAGACATCATCATCCCACAGGAGTATGGAATCACTAAAGCAGAGAAGCTGGACATCGCTAGTGCCTACTGTCTGCCGCTGGTCAAGAAGATTCAGCTGGATCTTCAGAGGACTCACGAGGATGAGGCCGTCAACAAGCTGCACCCACTGTACTCGCGGGGTGTGATGTCTCCGGGTCGACACGTTCGAACCCGGCTCTACTTCACCAGCGAGAGCCATGTGCACTCTCTGCTCAACATCTTTCGCTACGGAGGCCTGCTAAACGAGCAAAAAGACGAACAGTGGAAGCAGGCGATGGATTACCTCAGCGCTGTGACTGAACTCAACTATATGACGCAGATAGTTATTATGCTGTATGAGGACAATAACAAGGACCCTTCCTCAGAGGAGCGTTTTCACGTAGAGCTGCACTTTAGTCCAGGAGTGAAGGGCTGTAAGGATGAGGAAAATGCACCACTGGGTTTTGGCTTCAGGCCTGCTTCCTCTGagAACCACGAGAAGCAAACGAACCCAGGCAGTCTTGAAGACCTTTCTCAAGATGAGCCGGATAGAGCCGTACTCACTGAGCCAATCAACATCCAGAAGAAGTCACCGCTGGTCCGCAACCGCAAGGGTGGATCTATGGAGGCTCTATCAGAGAGCAACCCTTCATCTCGTGGCCTGGCATATCGTATCTTCCCCTCATCATCCCGTCAGTCACCAGAGATCAAACCCAGCGGCCTAGGAGCCCAGTGTGCAGGCCTCTTCAGCGCCTCCTTCCCAAACCTCAGAGATCTAACACGAGCACCACGAAAAAACCCCTCCTCACTCAAGAATCTGTCTTCTCAAGCCGAGCTGCTCTCTATGCCGGCAGTAAAGAGATTTTCTGTGTCGTATGCCAGGCATCCGACTAATGGGTTTGAAGGTTATTCGCTGGTGCCCTCCATCTATCCACTGGAGACCCTACACAACTCGCTGTCCCTCAAGCAGGTGGACGAGTTCCTGACCACACTGTGTAAGAACGGGAGCGAAACACAATTCAAGAGGCTCAAAACTCTGTCTGCCATGTTTGAGTCGCACTCCCAGCCATCCATAGATGTTGATAGTCTGGAGACCCCAGTGACCACCCCGGTCCAGAGTCAGCCAACTGCACAGTCTTTATGGTACACCGGTGGTCCTCCAAGTACCAGCTCGGGACCCTTGTCTCCTTCTGTAGCAGATCTCTCATCCAACTTCGCATTCAGCAGCGAATAAATGTCTTGCAAGTATTTTTTGATCAGTATCTGTTTAAAGGTTGAGGTTAAGATCGATATGGTCTTGGTAATCTATTTGTAAGCTGCTAATGTTGTGCTATCTACACTCGTGCCTGAACAAAACAGAACTGCTTAGGCGGAGATTCAGCTGATAGTTGGATCTGTCAGCAAATACAGCTCTGAAACCAGTAATTAGCTCTTCCGGTGGAGTCAGGTAGTAATTATGATCTCCGAGTCAGTGGCAGAAAGATAGAGCCAATCGAGACAAtagtagttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttgtcatcCCACACCAATGCAACTCGAATAAATAGCCAAAGGAGCACAGACCAATAAAGAATaagaattatgaatatttaatcaCTCAGATCTAGCTTTACAGAGTCAGTTTAATTTTACCACTGTTGTTTGGTTTGTATATACGATTttcttttgtgatttttgtttgttttagatgtTTTTGATTCTGTTTTAGATGAGATTAAAGTgaaaatttctgtatttttattataaaatgtgaaTGTATTGTTTGGGAATTATAAATGTGTGTAATATGAGCGTTTTCAAGAACTGTTTGCAATCTCCAGTTGTGTTTActctgtaaagtttttttttttaaagtatatttaattttagagaaatatattacataataaaacaGCTGCAAAAGTGTTTTGTGTGTGGTAATATTTTGGaggtatttttattactttttattgcttttccaaattactttttttat

Function

GO:

id name namespace
GO:0032958 inositol phosphate biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0006020 inositol metabolic process biological_process
GO:0005829 cytosol cellular_component
GO:0005737 cytoplasm cellular_component
GO:0000828 inositol hexakisphosphate kinase activity molecular_function
GO:0000829 inositol heptakisphosphate kinase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0102092 5-diphosphoinositol pentakisphosphate 3-kinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0033857 diphosphoinositol-pentakisphosphate kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-100426-5 Predicted to enable diphosphoinositol-pentakisphosphate kinase activity; inositol heptakisphosphate kinase activity; and inositol hexakisphosphate kinase activity. Predicted to be involved in inositol metabolic process and inositol phosphate biosynthetic process. Predicted to act upstream of or within phosphorylation. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to human PPIP5K1 (diphosphoinositol pentakisphosphate kinase 1).

Ensembl:

ensembl_id ENSDART00000193619

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00049222 lncRNA upstream 313784 18920543 ~ 18924391 (+) False XLOC_024031
TCONS_00049223 lncRNA upstream 313784 18920621 ~ 18924391 (+) False XLOC_024031
TCONS_00047686 lncRNA upstream 313784 18921825 ~ 18924391 (+) True XLOC_024031
TCONS_00047684 lncRNA upstream 352606 18884678 ~ 18885569 (+) True XLOC_024029
TCONS_00049221 lncRNA upstream 493146 18744021 ~ 18745029 (+) True XLOC_024027
TCONS_00049224 lncRNA downstream 9267 19356344 ~ 19362087 (+) True XLOC_024040
TCONS_00049225 lncRNA downstream 96874 19443951 ~ 19445512 (+) True XLOC_024041
TCONS_00047713 lncRNA downstream 205249 19552326 ~ 19556276 (+) True XLOC_024044
TCONS_00047728 lncRNA downstream 387083 19734160 ~ 19739965 (+) False XLOC_024051
TCONS_00047734 lncRNA downstream 523795 19870872 ~ 19883530 (+) False XLOC_024054
TCONS_00047701 mRNA upstream 32300 19201231 ~ 19205875 (+) True XLOC_024038
TCONS_00047698 mRNA upstream 45872 19149241 ~ 19192303 (+) False XLOC_024036
TCONS_00047699 mRNA upstream 45982 19149326 ~ 19192193 (+) True XLOC_024036
TCONS_00047700 mRNA upstream 62649 19170500 ~ 19175526 (+) True XLOC_024037
TCONS_00047696 mRNA upstream 120048 19105804 ~ 19118127 (+) False XLOC_024035
TCONS_00047705 mRNA downstream 138121 19485198 ~ 19521245 (+) False XLOC_024042
TCONS_00047706 mRNA downstream 142293 19489370 ~ 19520589 (+) False XLOC_024042
TCONS_00047708 mRNA downstream 175877 19522954 ~ 19536331 (+) False XLOC_024043
TCONS_00047709 mRNA downstream 176022 19523099 ~ 19537323 (+) False XLOC_024043
TCONS_00047710 mRNA downstream 182940 19530017 ~ 19535811 (+) True XLOC_024043
TCONS_00047695 other upstream 126367 19095302 ~ 19111808 (+) False XLOC_024035
TCONS_00047675 other upstream 749169 18482906 ~ 18489006 (+) True XLOC_024022
TCONS_00047672 other upstream 1140314 18097747 ~ 18097861 (+) True XLOC_024017
TCONS_00047663 other upstream 1359543 17862368 ~ 17878632 (+) False XLOC_024013
TCONS_00047656 other upstream 1629444 17605479 ~ 17608731 (+) True XLOC_024009
TCONS_00047707 other downstream 142473 19489550 ~ 19492620 (+) True XLOC_024042
TCONS_00047732 other downstream 427482 19774559 ~ 19774675 (+) True XLOC_024053
TCONS_00047755 other downstream 1245406 20592483 ~ 20592597 (+) True XLOC_024066
TCONS_00047756 other downstream 1256819 20603896 ~ 20604012 (+) True XLOC_024067
TCONS_00047785 other downstream 2878725 22225802 ~ 22238992 (+) True XLOC_024087