RNA id: XM_021570770.2


Basic Information

Item Value
RNA id XM_021570770.2
length 2862
RNA type mRNA
GC content 0.46
exon number 16
gene id LOC110495493
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13685206 ~ 13699630 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GGAGGAGAGCAGCATAAGACCCACAGACGGTCTAATAATGTGCAGTCTGATGACACCGGATGACTGGAAACAGCAGAAATGAAAGAGCTATGGATTATGGTTGTCTTTGCTACAGTCTCCTTTCCACAGGAGGATCTCATCACATCCTCTGCCATTCCAACCACCATTGACATAAAAAACCCAACAACTGATGACCCTATAACCCTAAATACTACTGGTCTTCCAACTACTGGTTACCCTACCTCTATCCCTATCACCAGTACCAGTCTCCCCaccacctccaacaccacctcTATCACCACAACCCCTCCTCTGGTCTGTAtaaatggtggtgagctgcagagTGGAGTCTGTATCTGTCCTGATGAGTGGACCGGAGACACCTGTTCAGAGGGGTATTTCTGCAATTCCACCAGGAAGGATGGATTCTCCTTCCCAAGAACGGTGGTTGGCTGGTCTGCTTATTCAGAAGAGTCATGTGATGAGAAGACAACCAGTGCTGGTTTACCAGTAGCCTTAGCAGAATGTTCAAATAACACTGGATCTCCACAGTTTGATGCTCCTAACAGGCTGGAGTGTGAATTAACCCTCAATGACATTCTAGGAAATATCTCCAGCAGTTCATCTCATTTACGAAAGTTAGCCTTCAGTACTCAGATCCTGACCTCCCAACCAAAGCGGCTGTCAGCTGAcaacatcaccacagcagctCAGATAGCTAACACACTGCTTCAGTCTGCAAATATCACAGAGGACATCACAGTGGCAGCTGTAACCACCATCAGTCAGCTGCTCAATGCCAGTGAGGAGagtacacaggagagagacgctGTCCAAAaCCTCACAGAGACCCTAGAGATGTTTTCCCTGGACCAGAACAATAATGTGTCCTCGGTGGTTCGGCCCAACGTGGCAGTCCAGTCTGTCCAAGTACCAAGTGACACAGTAGGGATCCAGTTTACTGCTCTGACTGGAAGATCTGGTAATTTTGTGGCCAACAGAATTCATCTCAACACCAATACCTCTGAACTGATAGCTGATGAAGGAGGTGCGACCGATGTCCAGATTGTTATCAAATTCCCACCAGTTTTGCATAGTAAAAACACAAACCACTCCATTGGTTTTGTGCTCTACCAAAACGACCGGTTCTTCAGGTCCAAGGCTTTCAGAGCTTCTCCAGGAACCAGCAGAAGGGTCATCTCTGCTAACCTGGGACAAGTGTCTGGGTTACATGTTGAGATGCTCTTCAAGCCCACAGCTGTTCCCAACACCTCCCTCTATGACTTTGCCTGCGTGTCATGGAACTACACGTTGAAAGACTGGAGCACCTTTGGCTGCTCCAAAGTCAACCACTCAGCAGACGGCCTGCAATGTTTCTGTAATCACACCACTAACTTTGCTGTGCTGATGTCGTTCAGGAGGGACTTTAAATACGCTGATGAGCTAAACTGGATCACCATATTGGGATGCTCCATGTCCATCATAGGGTTGAGTTTAACAATAACATTCCAGATGGTGACCAGGAAATCACGCAAAACCAACCCAACGGTCCTCTTAGTGAGCGTCTGCGTGTGTCTCCTGATCTTCACCCTCCTCTTCATGTTGGGAGTGAGCAACCCTCATAAACAGCTGGGCAAACCTAAAATACAGGAGGACAACATTCTCCCCCcgtccgacacacacacagagcgggaCAGAGGGCCCTGTACTGCAGTGGCAGTCCTGCTGCAGTACTTCCTGTTGGGGACGTTCACCTGGAACACGCTGTACGCCACACATGTCTTCCTAATGATCAGAAACAGCCTGGCCACCAGCCCATCACACTTCACAGCCTATACCGTGGCCATCGGATGGGGATTGCCTGCAGTTGTGGTGGCCCTCACCTTAGGAATTAGTTACAGAGTGGATGGTCCACTGGGATACAGGCAGGAGGAATTTTGCTGGCTTGCTGCCCTCGATCCAAAGGGGAACTTTGACTTCAAGCTGCCAATGTTTTGGGGGTTCCTGATCCCTGTGGCGTTCATGCTTATCTTCAACACAGTGGTGTTGGTATGTTTTACAGTTACAACAGCCAAGACCAACCCACATTTAACCAGTACAAGACACACATCGATGAAGAAGAAGTTCCTCAGTAGCTTTTCTCTGGCTGTGGTGCTCGGTCTCTCCTGGATCCTGGGCTATCTGTTGCTCATTACACAGAACCAGACCATGTACACCATACTCAACATCTCCTTCTGTGTTCTCACCACCACTCAGGGCTTGCAGATTTTCATTCTGTTCACCGCAAGAACATCAATTGTCAAGAAAATGATGTCAAGTACTTTGAAATCTATCTCTAGTGTTGGGATCCCTCTTCACACTAGGAAGTTCAGTCTATGGCGAGGCGAGCACAGTGATAACGTAGAATCATACACACAACAGGACACTGATCTGTCATTTCCACCTTGTTCCACAGACATCTAACTGATGGGCTGCAAGTTCAACCTCTGTTGTAAAATATCTCATATACCTCCACTATTGtcctataatatacagtataatacacacaACATTTTGTATGACGTATATTCACTGTGAATTCCCTTAGAAGTTGTGTTGTCCAATGAACTATCAAAATAAAGGAAGTGGCACACTGCATGCATCATCTCCCaacaatttaatgggtatttaccaacgtttcggcatcactgtgcctccCTTCAACCTGTTGTAAAATGTTTTATGTACCACACTATTGtcatataatatacagtataatacacaccATTTTCTATCAATGTATTGTTACTGTGAATTCCCTCAGAAGTTGTTGTCCAAGGATTTTTTGGCTatgcacatttttgtaaatatatatttttttaa

Function

GO: NA

KEGG:

id description
K08464 ADGRG7, GPR128; adhesion G-protein coupled receptor G7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1738803 lncRNA downstream 20485 13664465 ~ 13664721 (-) True G1518850
TU1738740 lncRNA downstream 98676 13586214 ~ 13586530 (-) True G1518797
TU1738727 lncRNA downstream 119194 13565782 ~ 13566012 (-) True G1518784
TU1738726 lncRNA downstream 120426 13564558 ~ 13564780 (-) True G1518783
TU1738715 lncRNA downstream 133082 13545769 ~ 13552124 (-) True G1518772
TU1738818 lncRNA upstream 18480 13718110 ~ 13720169 (-) True G1518861
TU1738921 lncRNA upstream 193742 13893372 ~ 13893872 (-) True G1518953
TU1738971 lncRNA upstream 270292 13969922 ~ 13970867 (-) False G1518992
TU1738970 lncRNA upstream 270783 13970413 ~ 13970867 (-) True G1518992
TU1738968 lncRNA upstream 271953 13971583 ~ 13972538 (-) True G1518991
XR_002469429.2 mRNA downstream 215136 13465904 ~ 13470070 (-) True LOC110495499
NM_001124414.1 mRNA downstream 246142 13421382 ~ 13439064 (-) True cd80
XR_005037377.1 mRNA downstream 275739 13406414 ~ 13409467 (-) False LOC110495500
XM_036951880.1 mRNA downstream 282547 13312628 ~ 13402659 (-) False bcor
XM_036951320.1 mRNA downstream 583528 13085376 ~ 13101678 (-) True LOC110495506
XM_036951889.1 mRNA upstream 7764 13707394 ~ 13711944 (-) True LOC110497005
XM_036951412.1 mRNA upstream 30730 13730360 ~ 13778831 (-) True LOC110495492
XM_021570767.2 mRNA upstream 95779 13795409 ~ 13799998 (-) False LOC110495490
XM_021570766.2 mRNA upstream 95779 13795409 ~ 13800006 (-) True LOC110495490
XM_036951891.1 mRNA upstream 103751 13803381 ~ 13816934 (-) False LOC110495489
TU1738554 other downstream 282585 13384756 ~ 13402621 (-) True bcor
TU1737891 other downstream 708765 12971653 ~ 12976441 (-) True LOC110513917
TU1737893 other downstream 774364 12906211 ~ 12910842 (-) True LOC110495512
TU1737781 other downstream 1084875 12583728 ~ 12600331 (-) False G1518019
TU1738815 other upstream 39821 13739451 ~ 13741567 (-) True G1518858
TU1738967 other upstream 271451 13971081 ~ 13972289 (-) False G1518991
TU1739561 other upstream 785049 14484679 ~ 14486096 (-) True G1519529
TU1739599 other upstream 806770 14506400 ~ 14507318 (-) True LOC110495482
TU1740147 other upstream 881339 14580969 ~ 14587559 (-) False LOC110495477

Expression Profile