RNA id: trnae-uuc-58



Basic Information


Item Value
RNA id trnae-uuc-58
length 72
RNA type mRNA
GC content 0.58
exon number 1
gene id trnae-uuc-58
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17621526 ~ 17621597 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tcccatatggtctagcggttaggattcctggttttcacccaggcgGCCCGGGTTCGACTCCCGGTATGGGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1743578 lncRNA downstream 72203 17537512 ~ 17549323 (-) True G1522824
TU1743604 lncRNA downstream 76808 17542028 ~ 17544718 (-) True G1522849
TU1743592 lncRNA downstream 78865 17517224 ~ 17542661 (-) True G1522838
TU1743600 lncRNA downstream 80921 17539911 ~ 17540605 (-) True G1522845
TU1743588 lncRNA downstream 117316 17503989 ~ 17504210 (-) True G1522834
TU1743662 lncRNA upstream 1112 17622709 ~ 17623011 (-) True G1522896
TU1743668 lncRNA upstream 16500 17638097 ~ 17638315 (-) True G1522902
TU1743655 lncRNA upstream 19277 17640874 ~ 17642338 (-) False LOC110528763
TU1743671 lncRNA upstream 26379 17647976 ~ 17649289 (-) True G1522905
TU1743658 lncRNA upstream 49204 17670801 ~ 17671929 (-) True LOC110528763
XM_036952075.1 mRNA downstream 29170 17576252 ~ 17592356 (-) True LOC110527367
XM_036952076.1 mRNA downstream 29764 17576252 ~ 17591762 (-) False LOC110527367
XM_036952061.1 mRNA downstream 568044 17016794 ~ 17053482 (-) False LOC110495689
XM_036952060.1 mRNA downstream 568044 17016795 ~ 17053482 (-) False LOC110495689
XM_036952063.1 mRNA downstream 568045 17016795 ~ 17053481 (-) False LOC110495689
trnae-uuc-59 mRNA upstream 1902 17623499 ~ 17623570 (-) True trnae-uuc-59
LOC110527378 mRNA upstream 9275 17630872 ~ 17633564 (-) True LOC110527378
XM_036952081.1 mRNA upstream 19770 17641367 ~ 17671930 (-) False LOC110528763
XM_036952082.1 mRNA upstream 19770 17641367 ~ 17671930 (-) False LOC110528763
XM_021608602.2 mRNA upstream 53610 17675207 ~ 17684566 (-) False LOC110527371
TU1743542 other downstream 171348 17441659 ~ 17450178 (-) True G1522794
TU1742514 other downstream 610148 17009382 ~ 17011378 (-) True LOC118941063
TU1742516 other downstream 678932 16937652 ~ 16942594 (-) True LOC110495686
TU1742232 other downstream 1202608 16418250 ~ 16418918 (-) True G1521712
TU1742040 other downstream 1536560 16055128 ~ 16084966 (-) True G1521546
TU1743656 other upstream 20821 17642418 ~ 17669959 (-) False LOC110528763
TU1743609 other upstream 66333 17687930 ~ 17702753 (-) True LOC118941106
TU1743613 other upstream 120370 17741967 ~ 17744898 (-) True LOC110510546
TU1743823 other upstream 430383 18051980 ~ 18053825 (-) False LOC118941107
TU1743824 other upstream 430383 18051980 ~ 18053825 (-) False LOC118941107