RNA id: trnal-cag-13



Basic Information


Item Value
RNA id trnal-cag-13
length 83
RNA type mRNA
GC content 0.60
exon number 1
gene id trnal-cag-13
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18024752 ~ 18024834 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtcaggatggccgagcggtctaaggcgctgcgttcaggtcgcagtctcccctggaggcgtgggttcgaatcccacttctgaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1743818 lncRNA downstream 2056 18022401 ~ 18022696 (-) True trnal-cag-10
TU1743780 lncRNA downstream 137997 17882977 ~ 17886755 (-) True G1522995
TU1743778 lncRNA downstream 144311 17880017 ~ 17880441 (-) True G1522993
TU1743776 lncRNA downstream 149928 17874608 ~ 17874824 (-) True G1522991
TU1743766 lncRNA downstream 169520 17854923 ~ 17855232 (-) True G1522981
TU1743843 lncRNA upstream 59690 18084524 ~ 18087754 (-) True G1523045
TU1743854 lncRNA upstream 79785 18104619 ~ 18105012 (-) True G1523056
TU1743861 lncRNA upstream 88637 18113471 ~ 18114182 (-) True G1523063
TU1743884 lncRNA upstream 138380 18163214 ~ 18163965 (-) True G1523081
TU1743871 lncRNA upstream 176417 18201251 ~ 18202588 (-) True G1523073
trnal-cag-12 mRNA downstream 772 18023898 ~ 18023980 (-) True trnal-cag-12
trnal-cag-11 mRNA downstream 1344 18023326 ~ 18023408 (-) True trnal-cag-11
trnal-cag-10 mRNA downstream 2199 18022471 ~ 18022553 (-) False trnal-cag-10
XM_036952098.1 mRNA downstream 12685 17939937 ~ 18012067 (-) False LOC110528772
trnal-cag-14 mRNA upstream 490 18025324 ~ 18025406 (-) True trnal-cag-14
trnal-cag-15 mRNA upstream 1349 18026183 ~ 18026265 (-) True trnal-cag-15
trnal-cag-16 mRNA upstream 1921 18026755 ~ 18026837 (-) True trnal-cag-16
trnal-cag-17 mRNA upstream 7655 18032489 ~ 18032571 (-) True trnal-cag-17
trnal-cag-18 mRNA upstream 8227 18033061 ~ 18033143 (-) True trnal-cag-18
TU1743613 other downstream 279854 17741967 ~ 17744898 (-) True LOC110510546
TU1743609 other downstream 321999 17687930 ~ 17702753 (-) True LOC118941106
TU1743656 other downstream 354793 17642418 ~ 17669959 (-) False LOC110528763
TU1743542 other downstream 574574 17441659 ~ 17450178 (-) True G1522794
TU1742514 other downstream 1013374 17009382 ~ 17011378 (-) True LOC118941063
TU1743823 other upstream 27146 18051980 ~ 18053825 (-) False LOC118941107
TU1743824 other upstream 27146 18051980 ~ 18053825 (-) False LOC118941107
TU1743827 other upstream 27146 18051980 ~ 18053825 (-) False LOC118941107
TU1743828 other upstream 27146 18051980 ~ 18053825 (-) True LOC118941107
TU1743984 other upstream 407259 18432093 ~ 18436052 (-) False G1523149