RNA id: trnak-cuu-73


Basic Information

Item Value
RNA id trnak-cuu-73
length 73
RNA type mRNA
GC content 0.62
exon number 1
gene id trnak-cuu-73
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19676281 ~ 19676353 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

Gcccggctagctcagtcggtagagcatgagactcttaatctcagggtcgtgggttcgagccccacgttgggcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1744771 lncRNA upstream 44766 19630938 ~ 19631515 (+) True G1523783
TU1744753 lncRNA upstream 75991 19596636 ~ 19600290 (+) True G1523765
TU1744750 lncRNA upstream 82390 19593341 ~ 19593891 (+) True G1523763
TU1744733 lncRNA upstream 99185 19574198 ~ 19577096 (+) False G1523753
TU1744871 lncRNA downstream 171846 19848199 ~ 19848792 (+) False G1523871
TU1744872 lncRNA downstream 172016 19848369 ~ 19848838 (+) True G1523871
TU1744895 lncRNA downstream 179373 19855726 ~ 19856055 (+) True G1523894
TU1744897 lncRNA downstream 181753 19858106 ~ 19858708 (+) True G1523896
TU1744924 lncRNA downstream 232547 19908900 ~ 19917765 (+) True LOC110495772
trnak-uuu-125 mRNA upstream 2905 19673304 ~ 19673376 (+) True trnak-uuu-125
trnak-uuu-124 mRNA upstream 4035 19672174 ~ 19672246 (+) True trnak-uuu-124
XM_036952211.1 mRNA upstream 7134 19655216 ~ 19669147 (+) False LOC110495766
trnan-guu-15 mRNA downstream 757 19677110 ~ 19677183 (+) True trnan-guu-15
XM_036951422.1 mRNA downstream 7483 19683836 ~ 19693492 (+) True LOC110497087
XM_036952222.1 mRNA downstream 17693 19694046 ~ 19729952 (+) False LOC110495767
XM_036952223.1 mRNA downstream 17716 19694069 ~ 19745286 (+) False LOC110495767
XM_036952215.1 mRNA downstream 17717 19694070 ~ 19745286 (+) False LOC110495767
TU1744679 other upstream 169025 19506392 ~ 19507256 (+) True G1523703
TU1744614 other upstream 231972 19442045 ~ 19444309 (+) True LOC110495755
TU1744577 other upstream 297809 19377067 ~ 19378472 (+) True G1523614
TU1744498 other upstream 469047 19206232 ~ 19207234 (+) False otomp
TU1744791 other downstream 74379 19750732 ~ 19754018 (+) False LOC110495769
TU1744790 other downstream 81962 19758315 ~ 19761020 (+) True LOC110495769
TU1744845 other downstream 98739 19775092 ~ 19827966 (+) True G1523847
TU1744915 other downstream 220707 19897060 ~ 19900019 (+) True LOC110495771
TU1744973 other downstream 316487 19992840 ~ 20010089 (+) False LOC110495777