RNA id: XR_002469489.2


Basic Information

Item Value
RNA id XR_002469489.2
length 1898
RNA type mRNA
GC content 0.47
exon number 13
gene id kynu
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 26253121 ~ 26267132 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CTGCTCATCACGTACATCCGCCCAATCGAAGGAATGGAAGAAATAATAGGCTGTCATGAAAAGCAACACATGACAGTCTATGAAGGAAGTAGGTCTACATAGTGCCTCTTATTCGACCATTTTGGATACAGGTGTTGTTTACAGTATCGATAATACCTCGCCAGTGAGTTTATCTCTGAGGTCAATTATTAGCTAACTGCGGGAATTTACAGAGGGGTGAAAGAGCACTCGTGAATGTGTCCGATTAACTCTCAAACTGGTGAAAGAGACTGTGATATATTCAACTGAAATTGGAAATACTTGCATTATCTGTAATGGACCCATTTGACGCCATGTCTCCGCGCAAGGTTCTGGAGCGCGTCTCTACTCTGCTGGGATGCAGCCAGACATCGAATGAAGTAGCCACATATCTGGACAATCACGACGAACTAAAGCATCTACGTGAACAGTTTCTATTACCCAAAGTTGCAGAACTCCCTCCTTCTGACCTTACGCTTGTGGATGGCACCAAGGAATGCATTTACTTTGTGGGGAACTCACTTGGCCTCCAGCCCAAAATGGCCAAGAAGTACATTGACGAGGAGTTGGATAAATGGGCTAAAACGGGGGTTCATGGCCATGTACAAGGCTCTCGACCTTGGGCCTGGGCGGAGAACAATATAGAGGGACTCATGGCTAATGTGGTTGGGGCTAAAGCTGAGGAGGTTGCCTTGATGAACGGGTTAACAGTTAATCTGCATATTCTGTTGCTGTCTTTTTACAAACCTACAGCAAAACGTCACAAAATCCTTCTTGAGGACAAGGCTTTCCCCTCAGACCATTATGCTGTGGAATCTCAGATCCAGTTGAAAGGTTACGACCCTAAGCAGAGCATGCTGCTCATGAAGCCCAGACCGGGCGAGGAGGTGCTGAGAACTGAGGACATTCTGGACACGATAGAAAAGGAGGGAGATTCCATTGCGGTGGTCCTGTTCAGTGGAGTGCAGTATTACACCGGGCAGCTCTTTGATATGGCCGCCATCACTAAAGCAGGGCAGAAGAAGGGCTGCTACGTTGGTTTTGACTGTGCACACGCAGTGGGCAATGCAGAGCTGAAGCTGCATGACTGGGGAGTGGACTTTGCCTGCTGGTGCTCCTACAAGTATGTGAATTCTGGAGCTGGTGGTCTGGCTGGAGCTTTTATCCATGAGAAGAATGCACGTACAGTCAAGCCTGCGCTCACGGGATGGTGGGGACATAACCTGAAAACAAGGTTCCGCATGGATAATGGTCTTTGCTATGACCAGTATGGCAGCTCTGAGGAAGAAGTCCAGACTTCTGACGGGTTACTTGGAGTGTCTGATCCAGCACTACTACAACAAGGACGAGTCCCAGCCTCACAAGCCCTACGTCCATATCATCACTCCCTCCCACCCTGAGGAACGAGGCTGccaactctccctctctttctctgtccccatCGCAGCCATATTCCAGGAGCTGGAGAAGAGGGGTGTTGCTTGTGACATGAGGGAACCCAACGTTCTGCGCATCGCTCCGGTGCCGCTCTACAACTCCTTTAGCGACGTGCACCGCTTCATCACTGTTCTAGGATCAGCTTTGGCTGCCAGCAAAGAACTACAACAATGATAGAAACAGTCTTTTATTGTTACCCCACCTTTCAGAGTATTTTTGACAGTGCGGTATGAAAACAAGATGTTTTTATCGACTATGTGCTGGAGTCACTGACAGGTCTTCTGAACTACTGTCCCAAAGAATTGCAATATGTTTTGCCTAGGCTACTCAGTAAAACAAAATTGGTTGGAATTGTATTCCTACTCAAAATTTAGTGAGACAAGTTTGTTGCCATACAATGTCAAATAAAAGCAAATAGTCAATTACTGTGAATCTCAATTCAA

Function

GO: NA

KEGG:

id description
K01556 KYNU, kynU; kynureninase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1753253 lncRNA upstream 215956 26036891 ~ 26037165 (+) True G1531450
TU1753248 lncRNA upstream 221576 26030725 ~ 26031545 (+) True G1531446
TU1753123 lncRNA upstream 360189 25892296 ~ 25892932 (+) True G1531332
TU1752682 lncRNA upstream 412768 25838506 ~ 25840353 (+) True G1530923
TU1752665 lncRNA upstream 430882 25821915 ~ 25822239 (+) True G1530909
TU1753395 lncRNA downstream 1697 26268829 ~ 26270336 (+) True G1531582
TU1753408 lncRNA downstream 39766 26306898 ~ 26307114 (+) True G1531595
TU1753593 lncRNA downstream 71692 26338824 ~ 26339078 (+) True G1531761
TU1753594 lncRNA downstream 72962 26340094 ~ 26340300 (+) True G1531762
TU1753722 lncRNA downstream 171119 26438251 ~ 26438530 (+) True G1531890
XM_021571447.2 mRNA upstream 279802 25961717 ~ 25973319 (+) True bzw1a
LOC110496782 mRNA upstream 318142 25930184 ~ 25934979 (+) False LOC110496782
XM_036952422.1 mRNA upstream 356675 25893317 ~ 25896446 (+) False arl4ca
XM_036952423.1 mRNA upstream 356675 25893324 ~ 25896446 (+) True arl4ca
XM_021571443.2 mRNA upstream 368964 25858996 ~ 25884157 (+) True sh3bp4a
XM_036952438.1 mRNA downstream 715849 26982981 ~ 27032712 (+) False LOC110495930
XM_021571460.2 mRNA downstream 715855 26982987 ~ 27032712 (+) False LOC110495930
XM_021571458.2 mRNA downstream 715856 26982988 ~ 27032712 (+) False LOC110495930
XM_021571459.2 mRNA downstream 715863 26982995 ~ 27032712 (+) False LOC110495930
XM_036952437.1 mRNA downstream 745844 27012976 ~ 27032712 (+) False LOC110495930
TU1753187 other upstream 309443 25934180 ~ 25943678 (+) True LOC110496782
TU1753186 other upstream 318163 25934180 ~ 25934958 (+) False LOC110496782
TU1752680 other upstream 413386 25838506 ~ 25839735 (+) False G1530923
TU1752681 other upstream 413386 25838506 ~ 25839735 (+) False G1530923
TU1752534 other upstream 681775 25566471 ~ 25571346 (+) True G1530785
TU1754169 other downstream 490237 26757369 ~ 26757677 (+) True G1532307
TU1754835 other downstream 1369408 27636540 ~ 27651825 (+) True LOC110495947
TU1755008 other downstream 1679946 27947078 ~ 27950222 (+) True LOC110495958
TU1755074 other downstream 1707681 27974813 ~ 28038476 (+) True G1533121
TU1756511 other downstream 2465643 28732775 ~ 28735228 (+) False LOC110495972

Expression Profile