Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1771621 |
| length | 520 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 1 |
| gene id | LOC110496213 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40029650 ~ 40034564 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1771616 | lncRNA | downstream | 4542 | 40025236 ~ 40025442 (-) | True | G1548260 |
| TU1771613 | lncRNA | downstream | 7986 | 40021788 ~ 40021998 (-) | True | G1548257 |
| TU1770872 | lncRNA | downstream | 104991 | 39924639 ~ 39924993 (-) | True | G1547609 |
| TU1770823 | lncRNA | downstream | 172121 | 39857659 ~ 39857863 (-) | True | G1547561 |
| TU1770820 | lncRNA | downstream | 173663 | 39856095 ~ 39856321 (-) | True | G1547558 |
| TU1771634 | lncRNA | upstream | 22872 | 40053375 ~ 40053601 (-) | True | G1548270 |
| TU1771691 | lncRNA | upstream | 124335 | 40154838 ~ 40169209 (-) | True | G1548317 |
| TU1771698 | lncRNA | upstream | 140356 | 40170859 ~ 40182138 (-) | True | G1548323 |
| TU1771700 | lncRNA | upstream | 140986 | 40171489 ~ 40172837 (-) | True | G1548324 |
| TU1771709 | lncRNA | upstream | 176136 | 40206639 ~ 40207042 (-) | True | G1548331 |
| XM_036952771.1 | mRNA | downstream | 10443 | 39974235 ~ 40019541 (-) | True | pvrl2l |
| XM_036952772.1 | mRNA | downstream | 10444 | 39933644 ~ 40019540 (-) | False | pvrl2l |
| XM_021571982.2 | mRNA | downstream | 132648 | 39864987 ~ 39897336 (-) | True | atp1a3a |
| XM_021571981.2 | mRNA | downstream | 204896 | 39755539 ~ 39825088 (-) | False | LOC110496210 |
| XM_021571986.2 | mRNA | upstream | 8040 | 40038543 ~ 40048166 (-) | False | LOC110496214 |
| XM_021571985.2 | mRNA | upstream | 8040 | 40038543 ~ 40048437 (-) | True | LOC110496214 |
| XM_021571987.2 | mRNA | upstream | 25891 | 40056394 ~ 40063549 (-) | True | LOC110496215 |
| XM_036952774.1 | mRNA | upstream | 49712 | 40080215 ~ 40093771 (-) | False | LOC110496218 |
| XM_021571989.2 | mRNA | upstream | 49712 | 40080215 ~ 40093772 (-) | False | LOC110496218 |
| TU1770684 | other | downstream | 341303 | 39684787 ~ 39688681 (-) | True | LOC110496816 |
| TU1770675 | other | downstream | 381970 | 39642855 ~ 39648014 (-) | False | LOC110496816 |
| TU1770674 | other | downstream | 383451 | 39642855 ~ 39646533 (-) | False | LOC110496816 |
| TU1770682 | other | downstream | 398886 | 39625775 ~ 39631098 (-) | True | LOC110496208 |
| TU1769526 | other | downstream | 1242183 | 38776284 ~ 38787801 (-) | True | G1546396 |
| TU1771745 | other | upstream | 355467 | 40385970 ~ 40391883 (-) | True | G1548367 |
| TU1771911 | other | upstream | 609672 | 40640175 ~ 40685641 (-) | True | G1548517 |
| TU1772024 | other | upstream | 875184 | 40905687 ~ 40908625 (-) | True | LOC118941164 |
| TU1773336 | other | upstream | 1632933 | 41663436 ~ 41671514 (-) | False | LOC110496277 |
| TU1773335 | other | upstream | 1637757 | 41668260 ~ 41671514 (-) | True | LOC110496277 |
