RNA id: XM_021572058.2



Basic Information


Item Value
RNA id XM_021572058.2
length 849
RNA type mRNA
GC content 0.50
exon number 4
gene id ndufb9
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 41165539 ~ 41169132 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTAATGCCAAATCGCAGACATCCAATGTCCCACAATCCTCATCGCCGCCGAAGGTGACAGGGGACAGAAAAAATGGCAACTGCGTACCTTACTCACCACCAAAAAGTCTTGAGGCTGTACAAAAAATCCTTGAGGCACCTTGAATCATGGTGTATTTTTAGGGATAAATACCGCTTTTACGCGTGTATGATGAGGGCACGCTTCGACGAGGCCAAGGATGAGAAGGACATGGTCAAAGCCACTATGATGCTGAAGGCAGGGGAGGAGGAATTCTGGTCTAACCAACACCCCCAGCCTTACCTATTCCCTGACTCTCCCGGAGGAACTTCATATGAAAGATATGAAATGTACAAGGTCCCCGAATGGTGTCTAGATCACTGGCATCCGTCAGAGAAGGCCATGTATCCTGACTACTTTGCCAAGAGGGAGCAGTGGAAGAAGCTGCGAGAACAGAGCTGGGCAGGAGAGGTTCAGCAGCTGCAGGAAGAGACCCCTGCCATTGGGCCCAAGACCGAGGCCCTGCCCCCGGCCCGTAAGGACGGTGACCTCCCCCCTCTGTGGTGGCAGTACGTCACCCGCCCCAGGGAGCGCCCCGTCTAAGAGCCCCCGGATGACACTACCTGGTGATAACTCCATAGTGGCACATGGCAGCTCACCACGGTACCTACTACCACACAACAGCATGCAGATTCACCTCCTGGGGAATTACTATCCATCTGTAAAGATAATTATATAATGGAGTTGTTGCAGTATGTTTTGTCAAAAGATATTCCACCCTGCCTGAATGACTTTCAAATGTACTTATTTTCCTGTACAAGGACATCTGTTTAAATAAATATGAGTATCATT

Function


GO: NA

KEGG:

id description
K03965 NDUFB9; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1772253 lncRNA downstream 33547 41131459 ~ 41131992 (-) True G1548824
TU1772154 lncRNA downstream 91675 41001115 ~ 41073864 (-) True G1548739
TU1772091 lncRNA downstream 207668 40889592 ~ 40957871 (-) True G1548678
TU1772025 lncRNA downstream 256914 40902519 ~ 40908625 (-) False LOC118941164
TU1772069 lncRNA downstream 314716 40850617 ~ 40850823 (-) True G1548658
TU1772277 lncRNA upstream 12934 41182066 ~ 41182287 (-) True G1548845
TU1772283 lncRNA upstream 34839 41203971 ~ 41205357 (-) True G1548848
TU1772489 lncRNA upstream 180951 41350083 ~ 41350320 (-) True G1549043
TU1772494 lncRNA upstream 187340 41356472 ~ 41356756 (-) True G1549048
TU1772501 lncRNA upstream 194992 41364124 ~ 41364360 (-) True G1549055
XM_036952832.1 mRNA downstream 256795 40903756 ~ 40908744 (-) False LOC118941164
XM_021572042.2 mRNA downstream 263547 40818257 ~ 40901992 (-) True LOC110496254
XM_021572039.2 mRNA downstream 263548 40814827 ~ 40901991 (-) False LOC110496254
XM_021572040.2 mRNA downstream 263549 40814827 ~ 40901990 (-) False LOC110496254
XM_036952831.1 mRNA downstream 263550 40814827 ~ 40901989 (-) False LOC110496254
XM_036952838.1 mRNA upstream 56553 41225685 ~ 41321792 (-) False LOC110496267
XM_036952839.1 mRNA upstream 56553 41225685 ~ 41321792 (-) False LOC110496267
XM_036952841.1 mRNA upstream 56553 41225685 ~ 41321792 (-) False LOC110496267
XM_036952840.1 mRNA upstream 56553 41225685 ~ 41327540 (-) True LOC110496267
XR_005037330.1 mRNA upstream 361611 41530743 ~ 41531326 (-) True LOC110496269
TU1772024 other downstream 256914 40905687 ~ 40908625 (-) True LOC118941164
TU1771911 other downstream 479898 40640175 ~ 40685641 (-) True G1548517
TU1771745 other downstream 773656 40385970 ~ 40391883 (-) True G1548367
TU1770684 other downstream 1476858 39684787 ~ 39688681 (-) True LOC110496816
TU1770675 other downstream 1517525 39642855 ~ 39648014 (-) False LOC110496816
TU1773336 other upstream 494304 41663436 ~ 41671514 (-) False LOC110496277
TU1773335 other upstream 499128 41668260 ~ 41671514 (-) True LOC110496277
TU1773748 other upstream 1146154 42315286 ~ 42316079 (-) True G1550177
TU1773779 other upstream 1190016 42359148 ~ 42359628 (-) True G1550202
TU1774432 other upstream 1725899 42895031 ~ 42897063 (-) False LOC118936491

Expression Profile