RNA id: trnal-uaa-4



Basic Information


Item Value
RNA id trnal-uaa-4
length 83
RNA type mRNA
GC content 0.53
exon number 1
gene id trnal-uaa-4
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 44237263 ~ 44237345 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACCAGGATGGCCgagaggttaaggcgttggacttaaGATCCAATGGACATATGTCCTCGTGGGTTCGAACCCCACTCCTGGTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1776075 lncRNA downstream 3494 44233524 ~ 44233769 (-) True G1552255
TU1776063 lncRNA downstream 4274 44229930 ~ 44232989 (-) True G1552243
TU1776065 lncRNA downstream 25840 44211086 ~ 44211423 (-) True G1552245
TU1776064 lncRNA downstream 26781 44210247 ~ 44210482 (-) True G1552244
TU1775827 lncRNA downstream 34035 44202990 ~ 44203228 (-) True G1552035
TU1776087 lncRNA upstream 21255 44258600 ~ 44261253 (-) False trnal-uaa-28
TU1776086 lncRNA upstream 23611 44260956 ~ 44264051 (-) True trnal-uaa-28
TU1776096 lncRNA upstream 38260 44275605 ~ 44276650 (-) True trnal-uaa-48
TU1776156 lncRNA upstream 146893 44384238 ~ 44384491 (-) True G1552331
TU1776173 lncRNA upstream 173343 44410688 ~ 44411062 (-) True G1552348
XM_021572178.2 mRNA downstream 27174 44205419 ~ 44210089 (-) True LOC110496344
XM_021572176.2 mRNA downstream 48755 44185888 ~ 44188508 (-) True LOC110496343
XM_021572175.2 mRNA downstream 54122 44169969 ~ 44183141 (-) True LOC110496342
XM_021572174.2 mRNA downstream 72124 44158843 ~ 44165139 (-) True LOC110496341
XM_021572163.2 mRNA downstream 224372 44010012 ~ 44012891 (-) False LOC110496339
trnal-uaa-5 mRNA upstream 717 44238062 ~ 44238144 (-) True trnal-uaa-5
trnal-uaa-6 mRNA upstream 1538 44238883 ~ 44238965 (-) True trnal-uaa-6
trnal-uaa-7 mRNA upstream 2336 44239681 ~ 44239763 (-) True trnal-uaa-7
trnal-uaa-8 mRNA upstream 3157 44240502 ~ 44240584 (-) True trnal-uaa-8
trnal-uaa-9 mRNA upstream 3956 44241301 ~ 44241383 (-) True trnal-uaa-9
TU1775356 other downstream 604386 43631006 ~ 43632877 (-) True LOC118940987
TU1774438 other downstream 1222144 42961990 ~ 43015119 (-) False LOC118936491
TU1776616 other upstream 583418 44820763 ~ 44828808 (-) True G1552768
TU1776725 other upstream 810335 45047680 ~ 45087786 (-) False G1552866
TU1776762 other upstream 827789 45065134 ~ 45073340 (-) True G1552875
TU1777490 other upstream 1430016 45667361 ~ 45667740 (-) True G1553544
TU1777651 other upstream 1550754 45788099 ~ 45792133 (-) False G1553693